RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 GYG1P46976 350 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 PDE1AP54750 535 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 MALLQ13021 153 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 CLUL1Q15846 466 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 GPR162Q16538 588 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 TTC39AQ5SRH9 613 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 MBNL2Q5VZF2 373 aaKnown RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 C15orf52Q6ZUT6 534 aaKnown RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 APBB1IPQ7Z5R6 666 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 CBARPQ8N350 705 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 OTUD7AQ8TE49 926 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 ZNF480Q8WV37 535 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 MTMR8Q96EF0 704 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 FAM84BQ96KN1 310 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 RTFDC1Q9BY42 306 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 SCAND2PQ9GZW5 306 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 ECHDC1Q9NTX5 307 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 RBM12Q9NTZ6 932 aaKnown RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 AURKAIP1Q9NWT8 199 aaPredicted RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 MKS1Q9NXB0 559 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 GPRC5DQ9NZD1 345 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 STAP2Q9UGK3 403 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 SCOCQ9UIL1 159 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 DBNLQ9UJU6 430 aaKnown RBP5.31□□□□□ -1.56
USP48-211ENST00000526044 TRHDEQ9UKU6 1024 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 CHD4Q14839 1912 aa5.31□□□□□ -1.56
USP48-211ENST00000526044 CCDC88AQ3V6T2 1871 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ARFGEF1Q9Y6D6 1849 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 A0A1B0GUL6 1792 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ITGA10O75578 1167 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 OSMP13725 252 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 AGXTP21549 392 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ACRV1P26436 265 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ADSLP30566 484 aaPredicted RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 CRHR1P34998 444 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 IARSP41252 1262 aaKnown RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 PHKA1P46020 1223 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 APBA1Q02410 837 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 USP39Q53GS9 565 aaKnown RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 PDZD4Q76G19 769 aaPredicted RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 ZNF804AQ7Z570 1209 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 SPRED1Q7Z699 444 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ELOA2Q8IYF1 753 aaPredicted RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 LILRA3Q8N6C8 439 aaPredicted RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 C1orf162Q8NEQ5 155 aaPredicted RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 MDGA1Q8NFP4 955 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ST8SIA2Q92186 375 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 FAXDC2Q96IV6 333 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 PDCD2LQ9BRP1 358 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ADI1Q9BV57 179 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 COA1Q9GZY4 146 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 BOLA2Q9H3K6 86 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 CD209Q9NNX6 404 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 ZNF277Q9NRM2 450 aaPredicted RBP5.3□□□□□ -1.56
USP48-211ENST00000526044 PCDHGA2Q9Y5H1 932 aa5.3□□□□□ -1.56
USP48-211ENST00000526044 LRRC37AA6NMS7 1700 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 FER1L6Q2WGJ9 1857 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 SHTN1A0MZ66 631 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 GABRDO14764 452 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 PPIP5K2O43314 1243 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 TPD52L2O43399 206 aaKnown RBP5.29□□□□□ -1.56
USP48-211ENST00000526044 FZD7O75084 574 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 MT-CO1P00395 513 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 MYBL2P10244 700 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 RBP3P10745 1247 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 GSPT1P15170 499 aaKnown RBP5.29□□□□□ -1.56
USP48-211ENST00000526044 KLRK1P26718 216 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 MCAMP43121 646 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 MAN2A2P49641 1150 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 CRHR2Q13324 411 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 MST1LQ2TV78 715 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 FAM214AQ32MH5 1076 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 NRN1LQ496H8 165 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 TTLL5Q6EMB2 1281 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 FAM83AQ86UY5 434 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 SKAP1Q86WV1 359 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 C1orf210Q8IVY1 113 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 ZFPM1Q8IX07 1006 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 TDRD7Q8NHU6 1098 aaKnown RBP5.29□□□□□ -1.56
USP48-211ENST00000526044 JDP2Q8WYK2 163 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 EXTL1Q92935 676 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 RILPL2Q969X0 211 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 SLC2A13Q96QE2 648 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 CPPED1Q9BRF8 314 aaPredicted RBP5.29□□□□□ -1.56
USP48-211ENST00000526044 TAOK3Q9H2K8 898 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 BCO1Q9HAY6 547 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 HOMER2Q9NSB8 354 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 MRFAP1Q9Y605 127 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 LRP5O75197 1615 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 MED23Q9ULK4 1368 aa5.29□□□□□ -1.56
USP48-211ENST00000526044 AOX1Q06278 1338 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 SALL3Q9BXA9 1300 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 KLHL33A6NCF5 533 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 GOLGA6L6A8MZA4 724 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 ECE2O60344 883 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 MAP4K4O95819 1239 aaPredicted RBP5.28□□□□□ -1.56
USP48-211ENST00000526044 IL1R1P14778 569 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 ECHS1P30084 290 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 SCNN1GP51170 649 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms