RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 GOLGA8SH3BPF8 625 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 C22orf31O95567 290 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 P4HA1P13674 534 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 PSMC1P62191 440 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 GPS1Q13098 491 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 OASLQ15646 514 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 KYAT1Q16773 422 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 PTPN20Q4JDL3 420 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 WDR78Q5VTH9 848 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 VSTM1Q6UX27 236 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 CEP120Q8N960 986 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 TTC13Q8NBP0 860 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 ZNF668Q96K58 619 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 OSBPL7Q9BZF2 842 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 SYNCQ9H7C4 482 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 CYP3A43Q9HB55 503 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 PCDH9Q9HC56 1237 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 KCNK9Q9NPC2 374 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 SIX4Q9UIU6 781 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 LACTBL1A8MY62 500 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 STAG3L1P0CL83 205 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 BRAFP15056 766 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 RDXP35241 583 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 RFC1P35251 1148 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 RAD23BP54727 409 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 NR1H3Q13133 447 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 ZNF268Q14587 947 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 TXNRD3NBQ6F5E7 133 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 C1orf127Q8N9H9 656 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 SHCBP1Q8NEM2 672 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 CCT6BQ92526 530 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 C9orf72Q96LT7 481 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 MINDY3Q9H8M7 445 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 EFCC1Q9HA90 598 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 SAYSD1Q9NPB0 183 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 CTNNAL1Q9UBT7 734 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 NAALADL1Q9UQQ1 740 aa17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-203ENST00000525503 CCT8L1PA6NM43 557 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 MAGEB2O15479 319 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 NFICP08651 508 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 RAP1GAPP47736 663 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 PLCB3Q01970 1234 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 SLC25A11Q02978 314 aaKnown RBP17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 MOGSQ13724 837 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 LAMC2Q13753 1193 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 FBXW10Q5XX13 1052 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 PCGF5Q86SE9 256 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 PRUNE1Q86TP1 453 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 CDR2LQ86X02 465 aaPredicted RBP17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 ASB7Q9H672 318 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 SHOC2Q9UQ13 582 aa17.38■□□□□ 0.37
CCDC90B-203ENST00000525503 C3orf70A6NLC5 250 aaPredicted RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 SGK1O00141 431 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 GPR25O00155 361 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 ZSCAN5DPP0CG00 497 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 PTPN11Q06124 597 aaPredicted RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 ACAP1Q15027 740 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 JADE1Q6IE81 842 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 XYLT1Q86Y38 959 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 IFNLR1Q8IU57 520 aaPredicted RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 TMEM192Q8IY95 271 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 SLC4A11Q8NBS3 891 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 SLC35B2Q8TB61 432 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 MGARPQ8TDB4 240 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 ACSF2Q96CM8 615 aaPredicted RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 CDCA5Q96FF9 252 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 ELAC2Q9BQ52 826 aaKnown RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 RNPEPQ9H4A4 650 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 VRTNQ9H8Y1 702 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 IFT122Q9HBG6 1241 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 POLR2AP24928 1970 aaKnown RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 LRCH4O75427 683 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 ITGB3P05106 788 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 IQCF3P0C7M6 154 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 INSRRP14616 1297 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 PECAM1P16284 738 aaPredicted RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 CDH8P55286 799 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 IGBP1P78318 339 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 TAZQ16635 292 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 RNASEH2BQ5TBB1 312 aaKnown RBP17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 CYP4F22Q6NT55 531 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 PPP1R21Q6ZMI0 780 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 ARHGEF18Q6ZSZ5 1173 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 TDRPQ86YL5 185 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 GLIS1Q8NBF1 620 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 JOSD2Q8TAC2 188 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 HAUS1Q96CS2 278 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 OPTNQ96CV9 577 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 TMEM176AQ96HP8 235 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 SDCBP2Q9H190 292 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 SMYD3Q9H7B4 428 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 ZWILCHQ9H900 591 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 PPCSQ9HAB8 311 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 PDGFCQ9NRA1 345 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 NKIRAS1Q9NYS0 192 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 CYTH4Q9UIA0 394 aa17.37■□□□□ 0.37
CCDC90B-203ENST00000525503 EXOC1LA0A1B0GW35 172 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms