RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CDK17Q00537 523 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 POU4F1Q01851 419 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CYP4A11Q02928 519 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 MALLQ13021 153 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CBX3Q13185 183 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 LASP1Q14847 261 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 GPR68Q15743 365 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 GPR19Q15760 415 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 TBCCQ15814 346 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 TTC39AQ5SRH9 613 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CCDC183Q5T5S1 534 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 ARL6IP4Q66PJ3 421 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 FDX2Q6P4F2 183 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 OLFM4Q6UX06 510 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 ATF7IPQ6VMQ6 1270 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CHSY3Q70JA7 882 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 GPR149Q86SP6 731 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 SCN4BQ8IWT1 228 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 ULK2Q8IYT8 1036 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 C17orf53Q8N3J3 647 aaPredicted RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 TMEM57Q8N5G2 664 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 DPP10Q8N608 796 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 TDRD5Q8NAT2 981 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 LINS1Q8NG48 757 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 SCAMP5Q8TAC9 235 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CEP76Q8TAP6 659 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 KIAA1524Q8TCG1 905 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CSGALNACT1Q8TDX6 532 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 ZNF384Q8TF68 577 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 VPS33AQ96AX1 596 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 KTI12Q96EK9 354 aaPredicted RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 PGAP3Q96FM1 320 aaPredicted RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 MAML3Q96JK9 1138 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 MRGPRX1Q96LB2 322 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 KREMEN1Q96MU8 473 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 AGAP3Q96P47 875 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 NEK1Q96PY6 1258 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 PRPF18Q99633 342 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 SLC30A3Q99726 388 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 TCHPQ9BT92 498 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 THUMPD3Q9BV44 507 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 PRDM14Q9GZV8 571 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 LACRTQ9GZZ8 138 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 MUC13Q9H3R2 512 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 PRDM12Q9H4Q4 367 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 MROH8Q9H579 483 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 MKNK2Q9HBH9 465 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 SNTG1Q9NSN8 517 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 SACM1LQ9NTJ5 587 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 PNPOQ9NVS9 261 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 RBM28Q9NW13 759 aaKnown RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 HCFC1R1Q9NWW0 138 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 AKAP7Q9P0M2 348 aaPredicted RBP4.83□□□□□ -1.64
CD44-213ENST00000525209 ACTR3BQ9P1U1 418 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 DNAJB9Q9UBS3 223 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 ADGRE2Q9UHX3 823 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CPA4Q9UI42 421 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 TMPRSS11EQ9UL52 423 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 CAMK2AQ9UQM7 478 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 NAALADL1Q9UQQ1 740 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 ITM2BQ9Y287 266 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 B3GALT1Q9Y5Z6 326 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 HS3ST4Q9Y661 456 aa4.83□□□□□ -1.64
CD44-213ENST00000525209 URB2Q14146 1524 aaKnown RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 SPAG9O60271 1321 aaKnown RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 CLRN2A0PK11 232 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 FAM177BA6PVY3 158 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 H0Y8X5 98 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 KCNK3O14649 394 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 MCF2LO15068 1137 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 PROM1O43490 865 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 STX6O43752 255 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 RTN2O75298 545 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 METTL18O95568 372 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 OLFM2O95897 454 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 PNPP00491 289 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 SLFN14P0C7P3 912 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 PLS3P13797 630 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 TYRP14679 529 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 EPHA1P21709 976 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 PAX7P23759 505 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 HSPA1LP34931 641 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 IFNAR2P48551 515 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 MLLT6P55198 1093 aaPredicted RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 LGALS4P56470 323 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 HERVK_113P62684 666 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 TUSC3Q13454 348 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 SLBPQ14493 270 aaKnown RBP eCLIP4.82□□□□□ -1.64
CD44-213ENST00000525209 GRIK5Q16478 980 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 PCSK7Q16549 785 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 SMU1Q2TAY7 513 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 MAJINQ3KP22 176 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 RABL6Q3YEC7 729 aaPredicted RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 CAVIN4Q5BKX8 364 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 DCAF17Q5H9S7 520 aaPredicted RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 TOR1AIP1Q5JTV8 583 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 KRBOX4Q5JUW0 171 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 PLEKHS1Q5SXH7 462 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 FAM182BQ5T319 152 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 ZNF468Q5VIY5 522 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms