RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 EPHB3P54753 998 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 DLG4P78352 724 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 TRIP6Q15654 476 aaKnown RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 PTPN14Q15678 1187 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 TM4SF20Q53R12 229 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 FBLN7Q53RD9 439 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 ZC3H12BQ5HYM0 836 aaKnown RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 CT47A1Q5JQC4 288 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 FAM209AQ5JX71 171 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 ZBTB41Q5SVQ8 909 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 CES5AQ6NT32 575 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 BHLHB9Q6PI77 547 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 NSMFQ6X4W1 530 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 PPP1R42Q7Z4L9 355 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 LONP2Q86WA8 852 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 THNSL2Q86YJ6 484 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 MIB1Q86YT6 1006 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 SCUBE1Q8IWY4 988 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 SLC34A3Q8N130 599 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 LZTR1Q8N653 840 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 UBR7Q8N806 425 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 PCSK9Q8NBP7 692 aaKnown RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 SH3RF3Q8TEJ3 882 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 DCAF4Q8WV16 495 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 NINJ1Q92982 152 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 HOOK2Q96ED9 719 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 MFSD3Q96ES6 412 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 CAMK1GQ96NX5 476 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 RPS6KC1Q96S38 1066 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 YME1L1Q96TA2 773 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 MYD88Q99836 296 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 DDX23Q9BUQ8 820 aaKnown RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 OSBPL6Q9BZF3 934 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 PLA2G2FQ9BZM2 168 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 CAAP1Q9H8G2 361 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 TCP11L1Q9NUJ3 509 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 TRMT13Q9NUP7 481 aaKnown RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 IGSF9Q9P2J2 1179 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 TIMM13Q9Y5L4 95 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 PTPRFP10586 1907 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 CLSPNQ9HAW4 1339 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 TRBV23-1A0A0A0MS06 115 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 ABHD14A-ACY1A0A1B0GW23 586 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 PATE3B3GLJ2 98 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 SGSM2O43147 1006 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 ALDH1L1O75891 902 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 HLA-EP13747 358 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 HOXB8P17481 243 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-209ENST00000525132 FPR2P25090 351 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 HOXC13P31276 330 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 SOX5P35711 763 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 STAT3P40763 770 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 BCL6P41182 706 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 GPR85P60893 370 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 HERVK_113P62684 666 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 RPL11P62913 178 aaKnown RBP3.78□□□□□ -1.8
CSDE1-209ENST00000525132 IRX4P78413 519 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 PABPC4Q13310 644 aaKnown RBP eCLIP3.78□□□□□ -1.81e-13■■□□□ 12
CSDE1-209ENST00000525132 RAB3GAP1Q15042 981 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 NFE2Q16621 373 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-209ENST00000525132 DUSP6Q16828 381 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 MAP9Q49MG5 647 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 MROH9Q5TGP6 573 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 KCNT2Q6UVM3 1135 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 CXCL17Q6UXB2 119 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 SPOCD1Q6ZMY3 1216 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 SYDE1Q6ZW31 735 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-209ENST00000525132 CACNA2D4Q7Z3S7 1137 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 TEX2Q8IWB9 1127 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 ZNF34Q8IZ26 560 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 MYOCDQ8IZQ8 938 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 TTC5Q8N0Z6 440 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 GLIS1Q8NBF1 620 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 ATL2Q8NHH9 583 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.78□□□□□ -1.8
CSDE1-209ENST00000525132 CPA5Q8WXQ8 436 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 PPP1R14AQ96A00 147 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 FAM20AQ96MK3 541 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 PPP1R16BQ96T49 567 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 DHRS4Q9BTZ2 278 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 PHF20Q9BVI0 1012 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 LTB4R2Q9NPC1 389 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 LRP2BPQ9P2M1 347 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 PPARGC1AQ9UBK2 798 aaKnown RBP3.78□□□□□ -1.8
CSDE1-209ENST00000525132 MCM8Q9UJA3 840 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 ADAM21Q9UKJ8 722 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 MRPS23Q9Y3D9 190 aaKnown RBP3.78□□□□□ -1.8
CSDE1-209ENST00000525132 SCN10AQ9Y5Y9 1956 aa3.78□□□□□ -1.8
CSDE1-209ENST00000525132 CCDC163A0A0D9SF12 145 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 NUDT19A8MXV4 375 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 PLK4O00444 970 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 AKR1A1P14550 325 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 ATF2P15336 505 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 CST5P28325 142 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 MTHFRP42898 656 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 RPS9P46781 194 aaKnown RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 EPHB1P54762 984 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 RPS8P62241 208 aaKnown RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 SUMO1P63165 101 aaKnown RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 IRX3P78415 501 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms