RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GPR32O75388 356 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 FPR1P21462 350 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 HSD3B2P26439 372 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 PLA2G5P39877 138 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 GPR3P46089 330 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 SLC6A9P48067 706 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 MTNR1BP49286 362 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 VAV2P52735 878 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 EVA1CP58658 441 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 RBM6P78332 1123 aaKnown RBP3.82□□□□□ -1.8
CSDE1-208ENST00000524652 HSD11B2P80365 405 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 TMPRSS15P98073 1019 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 SRSF2Q01130 221 aaKnown RBP3.82□□□□□ -1.8
CSDE1-208ENST00000524652 NOMO1Q15155 1222 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 CYP2A13Q16696 494 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 CT47A1Q5JQC4 288 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-208ENST00000524652 SULT6B1Q6IMI4 303 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 FOXR2Q6PJQ5 311 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 CCDC146Q8IYE0 955 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 COLGALT2Q8IYK4 626 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 TCP11L2Q8N4U5 519 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 NUP133Q8WUM0 1156 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 AHCYL2Q96HN2 611 aaKnown RBP3.82□□□□□ -1.8
CSDE1-208ENST00000524652 MED15Q96RN5 788 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 LRFN3Q9BTN0 628 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 SPATA5L1Q9BVQ7 753 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 VTA1Q9NP79 307 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 CASS4Q9NQ75 786 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 CCM2LQ9NUG4 571 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-208ENST00000524652 FBXO34Q9NWN3 711 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 DNAJC28Q9NX36 388 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 LRIT1Q9P2V4 623 aa3.82□□□□□ -1.8
CSDE1-208ENST00000524652 CASZ1Q86V15 1759 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 CICQ96RK0 1608 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 SALL3Q9BXA9 1300 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 TLDC2A0PJX2 215 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 CCER2I3L3R5 266 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 INO80B-WBP1J3KQ70 363 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 ERN1O75460 977 aaKnown RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 EYA4O95677 639 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 U2AF1L5P0DN76 240 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 CKBP12277 381 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 SLC6A2P23975 617 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 PCSK1P29120 753 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 PRKAR2BP31323 418 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 PTH2RP49190 550 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 RARRES1P49788 294 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 CACNA2D1P54289 1103 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 U2AF1Q01081 240 aaKnown RBP eCLIP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 NHLH1Q02575 133 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 MTM1Q13496 603 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 SEPT2Q15019 361 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 ATP2B3Q16720 1220 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 MTHFSDQ2M296 383 aaKnown RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 DACT2Q5SW24 774 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF362Q5T0B9 420 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 PTF1AQ7RTS3 328 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 LNX2Q8N448 690 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 STON2Q8WXE9 905 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 NACC2Q96BF6 587 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 PNKPQ96T60 521 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 INO80BQ9C086 356 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 MANSC1Q9H8J5 431 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 UNKLQ9H9P5 680 aaKnown RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 SEMA4GQ9NTN9 838 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 FOXJ2Q9P0K8 574 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 USP25Q9UHP3 1055 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 DMTF1Q9Y222 760 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 THRAP3Q9Y2W1 955 aaKnown RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 MTO1Q9Y2Z2 717 aaKnown RBP3.81□□□□□ -1.8
CSDE1-208ENST00000524652 ACTL7AQ9Y615 435 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 UBR3Q6ZT12 1888 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF831Q5JPB2 1677 aa3.81□□□□□ -1.8
CSDE1-208ENST00000524652 CUL9Q8IWT3 2517 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 PLEKHG2Q9H7P9 1386 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 CCDC78A2IDD5 438 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 K7ESF4 209 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 MGST3O14880 152 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 GPR39O43194 453 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 PRSS23O95084 383 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 CDK4P11802 303 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 OSMP13725 252 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 GSPT1P15170 499 aaKnown RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 PHKG2P15735 406 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 MASP1P48740 699 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 MRPS35P82673 323 aaKnown RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 DCTN1Q14203 1278 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 UBE3BQ7Z3V4 1068 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 SPATS2Q86XZ4 545 aaKnown RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 FAM9BQ8IZU0 186 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 FITM2Q8N6M3 262 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 ZCRB1Q8TBF4 217 aaKnown RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 CCHCR1Q8TD31 782 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 ACTRT2Q8TDY3 377 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 SSH1Q8WYL5 1049 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 PTCD3Q96EY7 689 aaKnown RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 PDLIM2Q96JY6 352 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 CFAP53Q96M91 514 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 MYOCQ99972 504 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 HEPHQ9BQS7 1158 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms