RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 KCNJ1P48048 391 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 GLRBP48167 497 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 RPS7P62081 194 aaKnown RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 CLEC16AQ2KHT3 1053 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 OTOAQ7RTW8 1153 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 TTC39CQ8N584 583 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 DNAJB3Q8WWF6 145 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 LRRC1Q9BTT6 524 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 ETNK1Q9HBU6 452 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 NEU2Q9Y3R4 380 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 STX7O15400 261 aaKnown RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 EXTL3O43909 919 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 RFC5P40937 340 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 PLA2G4AP47712 749 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 FMR1Q06787 632 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■■■■■ 26.8
CTSC-203ENST00000524463 PTK7Q13308 1070 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 C16orf86Q6ZW13 317 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 VPS50Q96JG6 964 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 RUSC1Q9BVN2 902 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 CELF4Q9BZC1 486 aaKnown RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 FAM129AQ9BZQ8 928 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 CYP4F12Q9HCS2 524 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 FDX1P10109 184 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 ACAT1P24752 427 aaKnown RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 FNTAP49354 379 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 AP2B1P63010 937 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 RGL4Q8IZJ4 473 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 ZNF669Q96BR6 464 aaPredicted RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 PDGFDQ9GZP0 370 aaPredicted RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 EXOSC4Q9NPD3 245 aaKnown RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 FBXO2Q9UK22 296 aaPredicted RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 CST8O60676 142 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 GPC1P35052 558 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 CPA2P48052 419 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 IYDQ6PHW0 289 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 EDEM1Q92611 657 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 CCDC3Q9BQI4 270 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 PIH1D1Q9NWS0 290 aaKnown RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 PCDHB12Q9Y5F1 795 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 TRPC1P48995 793 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 ZNF555Q8NEP9 628 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 DIS3LQ8TF46 1054 aaKnown RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 RBM15Q96T37 977 aaKnown RBP eCLIP10.93□□□□□ -0.66
CTSC-203ENST00000524463 YIPF3Q9GZM5 350 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 TAF1DQ9H5J8 278 aaPredicted RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 POLLQ9UGP5 575 aa10.93□□□□□ -0.66
CTSC-203ENST00000524463 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
CTSC-203ENST00000524463 H7C4K7 107 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 PDXKO00764 312 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 H2AFYO75367 372 aaKnown RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 EPHB3P54753 998 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 CCDC81Q6ZN84 652 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 TFAP2DQ7Z6R9 452 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 GUF1Q8N442 669 aaKnown RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 CHST13Q8NET6 341 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 RNF112Q9ULX5 631 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 SNX8Q9Y5X2 465 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 WBP4O75554 376 aaKnown RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 ABCB1P08183 1280 aaPredicted RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 ALDH9A1P49189 494 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 RGS4P49798 205 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 BEX3Q00994 111 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 CAMK2GQ13555 558 aaPredicted RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 TP53BP2Q13625 1128 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 HIST2H2ACQ16777 129 aaPredicted RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 HIST2H2AA3Q6FI13 130 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 PALB2Q86YC2 1186 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 ATXN3LQ9H3M9 355 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 ADARB2Q9NS39 739 aaKnown RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 SNTG2Q9NY99 539 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 PSD3Q9NYI0 1048 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 CDYLQ9Y232 598 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 KDM6BO15054 1643 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 SLC37A4O43826 429 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 STAU1O95793 577 aaKnown RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 CDC42EP1Q00587 391 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 MTHFD1LQ6UB35 978 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 ATL2Q8NHH9 583 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 PNMA5Q96PV4 448 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 LCMT1Q9UIC8 334 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 MCM8Q9UJA3 840 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 CPSF1Q10570 1443 aaKnown RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 NRKQ7Z2Y5 1582 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 ENTPD3O75355 529 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 GHRP10912 638 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 COMTP21964 271 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 RAD23BP54727 409 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 STYK1Q6J9G0 422 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 EMBQ6PCB8 327 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 C3orf62Q6ZUJ4 267 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 DNAAF5Q86Y56 855 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 TSPAN17Q96FV3 270 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 AHCYL2Q96HN2 611 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms