RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PRPF40AO75400 957 aaKnown RBP12.73□□□□□ -0.37
SPARC-206ENST00000524277 F11P03951 625 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 ITGB3P05106 788 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 TMEM191BP0C7N4 346 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 POLR2BP30876 1174 aaKnown RBP12.73□□□□□ -0.37
SPARC-206ENST00000524277 NLRP12P59046 1061 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 CYP4F8P98187 520 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 SATB1Q01826 763 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 KCNA1Q09470 495 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 BFSP1Q12934 665 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 CC2D1AQ6P1N0 951 aaPredicted RBP12.73□□□□□ -0.37
SPARC-206ENST00000524277 MON1AQ86VX9 555 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 GPD1LQ8N335 351 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 C1orf127Q8N9H9 656 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 GIPC2Q8TF65 315 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 TRMT2BQ96GJ1 504 aaKnown RBP12.73□□□□□ -0.37
SPARC-206ENST00000524277 ANKRD36BP1Q96IX9 119 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 MYRFLQ96LU7 910 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 LRRC3BQ96PB8 259 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 FAM83CQ9BQN1 747 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 TNMDQ9H2S6 317 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 TDP1Q9NUW8 608 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
SPARC-206ENST00000524277 GTSE1Q9NYZ3 720 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 TBC1D7Q9P0N9 293 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 COL4A2P08572 1712 aa12.73□□□□□ -0.37
SPARC-206ENST00000524277 TICRRQ7Z2Z1 1910 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 CCDC163A0A0D9SF12 145 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 ZNF233A6NK53 670 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 FAM163BP0C2L3 166 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 HMGA1P17096 107 aaKnown RBP12.72□□□□□ -0.37
SPARC-206ENST00000524277 NASPP49321 788 aaPredicted RBP12.72□□□□□ -0.37
SPARC-206ENST00000524277 SNRPFP62306 86 aaKnown RBP12.72□□□□□ -0.37
SPARC-206ENST00000524277 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
SPARC-206ENST00000524277 GRSF1Q12849 480 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPARC-206ENST00000524277 RUNX3Q13761 415 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 CCINQ13939 588 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 SIM2Q14190 667 aaPredicted RBP12.72□□□□□ -0.37
SPARC-206ENST00000524277 GAS6Q14393 721 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 PDGFRLQ15198 375 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 MAPRE1Q15691 268 aaKnown RBP12.72□□□□□ -0.37
SPARC-206ENST00000524277 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
SPARC-206ENST00000524277 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 MAB21L3Q8N8X9 362 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 FSIP1Q8NA03 581 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 CCDC26Q8TAB7 109 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 SAAL1Q96ER3 474 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 RTKNQ9BST9 563 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 PI4K2AQ9BTU6 479 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 GKN1Q9NS71 199 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 EHD2Q9NZN4 543 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 USP18Q9UMW8 372 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
SPARC-206ENST00000524277 TRDMT1O14717 391 aaKnown RBP12.71□□□□□ -0.37
SPARC-206ENST00000524277 GABRDO14764 452 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 STX6O43752 255 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 PPP6R2O75170 966 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 NOL4O94818 638 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 TNNC2P02585 160 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 KRT19P08727 400 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 PFKLP17858 780 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 TGM1P22735 817 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 MAGEA11P43364 429 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 SOX9P48436 509 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 PDE6CP51160 858 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 PON2Q15165 354 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 STK38Q15208 465 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 DUOXA2Q1HG44 320 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 FBXO43Q4G163 708 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 TXNDC11Q6PKC3 985 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 PRR23BQ6ZRT6 265 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 TMEM150AQ86TG1 271 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 SPATA2LQ8IUW3 424 aaPredicted RBP12.71□□□□□ -0.37
SPARC-206ENST00000524277 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 CXorf38Q8TB03 319 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 ZFYVE19Q96K21 471 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 ZNF396Q96N95 335 aaPredicted RBP12.71□□□□□ -0.37
SPARC-206ENST00000524277 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 CBWD1Q9BRT8 395 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 INTS13Q9NVM9 706 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 CDV3Q9UKY7 258 aaKnown RBP12.71□□□□□ -0.37
SPARC-206ENST00000524277 MAGED2Q9UNF1 606 aaPredicted RBP12.71□□□□□ -0.37
SPARC-206ENST00000524277 MTMR6Q9Y217 621 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 SNX9Q9Y5X1 595 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 ANK1P16157 1881 aa12.71□□□□□ -0.37
SPARC-206ENST00000524277 NUP210Q8TEM1 1887 aaPredicted RBP12.71□□□□□ -0.37
SPARC-206ENST00000524277 K7ESF4 209 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPARC-206ENST00000524277 PRPF6O94906 941 aaKnown RBP12.7□□□□□ -0.38
SPARC-206ENST00000524277 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 DRD1P21728 446 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 CASP5P51878 434 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 FAM160A1Q05DH4 1040 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 NR1H3Q13133 447 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 TMEM196Q5HYL7 178 aa12.7□□□□□ -0.38
SPARC-206ENST00000524277 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms