RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 RARGP13631 454 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 CHRNB2P17787 502 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 RDXP35241 583 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 COILP38432 576 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 IFI35P80217 286 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 BFSP1Q12934 665 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 TRAF1Q13077 416 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 ZNF211Q13398 564 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SLC29A2Q14542 456 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 C1orf220Q5T0J3 134 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 PHLDB3Q6NSJ2 640 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 AADACL2Q6P093 401 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 CCDC62Q6P9F0 684 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 TRAF7Q6Q0C0 670 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 VSTM1Q6UX27 236 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 TRMT10CQ7L0Y3 403 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 ZNF720Q7Z2F6 126 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 CPLX4Q7Z7G2 160 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 ARHGEF19Q8IW93 802 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 MAB21L3Q8N8X9 362 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 CCDC63Q8NA47 563 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SNIP1Q8TAD8 396 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 EPS8L3Q8TE67 593 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SLC20A1Q8WUM9 679 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 AFG1LQ8WV93 481 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 PSPC1Q8WXF1 523 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 GLG1Q92896 1179 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 C18orf8Q96DM3 657 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SCLYQ96I15 445 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 UIMC1Q96RL1 719 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SELENOSQ9BQE4 189 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 TRIM31Q9BZY9 425 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 NSRP1Q9H0G5 558 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SEMA4AQ9H3S1 761 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 NOD2Q9HC29 1040 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 CYLDQ9NQC7 956 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 DNAAF2Q9NVR5 837 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 KCND2Q9NZV8 630 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 NOCTQ9UK39 431 aaKnown RBP8.31□□□□□ -1.08
SPIDR-223ENST00000524033 AGAP1Q9UPQ3 857 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 SLC4A7Q9Y6M7 1214 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 REV3LO60673 3130 aa8.31□□□□□ -1.08
SPIDR-223ENST00000524033 FSCN2O14926 492 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 RGS16O15492 202 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 SIAH2O43255 324 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 RTN2O75298 545 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 ARIH2O95376 493 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 GJB6O95452 261 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 GH1P01241 217 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 NR3C2P08235 984 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 TRIM49P0CI25 452 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 TRIM49CP0CI26 452 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 RARAP10276 462 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 EIF2AK2P19525 551 aaKnown RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 PLTPP55058 493 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 CYP4A11Q02928 519 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 PTPN11Q06124 597 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 SLMAPQ14BN4 828 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 RAB30Q15771 203 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 DGKDQ16760 1214 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 ODF2Q5BJF6 829 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 SEL1L2Q5TEA6 688 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 TRPM8Q7Z2W7 1104 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 DEFB128Q7Z7B8 93 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 EXOC3L1Q86VI1 746 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 SLC13A5Q86YT5 568 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 DAW1Q8N136 415 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 UBL4BQ8N7F7 174 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 CCHCR1Q8TD31 782 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 DYDC2Q96IM9 177 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 SERPINB12Q96P63 405 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 PCDHB18PQ96TA0 734 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 STMN4Q9H169 189 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 LRRC19Q9H756 370 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 SLC28A3Q9HAS3 691 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 PARVGQ9HBI0 331 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 PXMP2Q9NR77 195 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 ABCF3Q9NUQ8 709 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 INTS9Q9NV88 658 aaKnown RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 EURLQ9NYK6 297 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 MAP3K20Q9NYL2 800 aaKnown RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 RGL1Q9NZL6 768 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 WHRNQ9P202 907 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 COL20A1Q9P218 1284 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 MTRF1LQ9UGC7 380 aaKnown RBP8.3□□□□□ -1.08
SPIDR-223ENST00000524033 PRKAG3Q9UGI9 489 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 LGALS13Q9UHV8 139 aa8.3□□□□□ -1.08
SPIDR-223ENST00000524033 TCRBV7S2A1N4TA0A589 114 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 O00370 1275 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 FOXN3O00409 490 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-223ENST00000524033 RASGRF2O14827 1237 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 WFS1O76024 890 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 SLITRK3O94933 977 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 UBOX5O94941 541 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 PFKMP08237 780 aa8.29□□□□□ -1.08
SPIDR-223ENST00000524033 MYCLP12524 364 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms