RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SLC25A43Q8WUT9 341 aaPredicted RBP4.7□□□□□ -1.66
SKP1-212ENST00000523966 EXTL1Q92935 676 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 SLC39A13Q96H72 371 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 PLEKHG4BQ96PX9 1271 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 NEU1Q99519 415 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 CHST8Q9H2A9 424 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 ETAA1Q9NY74 926 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 MAP3K2Q9Y2U5 619 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 TRGV11A0A075B6L2 103 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 ABHD14A-ACY1A0A1B0GW23 586 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 RAB27BO00194 218 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 FGF18O76093 207 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 FOSP01100 380 aaPredicted RBP4.69□□□□□ -1.66
SKP1-212ENST00000523966 HARSP12081 509 aaKnown RBP4.69□□□□□ -1.66
SKP1-212ENST00000523966 TPH1P17752 444 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 ABCB4P21439 1286 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 FGFR2P21802 821 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 DDX6P26196 483 aaKnown RBP eCLIP4.69□□□□□ -1.66
SKP1-212ENST00000523966 IL1R2P27930 398 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 NPTX2P47972 431 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 NDUFV1P49821 464 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 PRKAG1P54619 331 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 CXADRP78310 365 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 DYRK1AQ13627 763 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 TOB2Q14106 344 aaPredicted RBP4.69□□□□□ -1.66
SKP1-212ENST00000523966 ARHGEF7Q14155 803 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 E2F2Q14209 437 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 HLXQ14774 488 aaPredicted RBP4.69□□□□□ -1.66
SKP1-212ENST00000523966 STARD3Q14849 445 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 ZRSR2Q15696 482 aaKnown RBP4.69□□□□□ -1.66
SKP1-212ENST00000523966 SPATS1Q496A3 300 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 TIGD2Q4W5G0 525 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 CACHD1Q5VU97 1274 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 PGBD2Q6P3X8 592 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 FBXO38Q6PIJ6 1188 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 TMEM108Q6UXF1 575 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 MICALCLQ6ZW33 695 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 SMC5Q8IY18 1101 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 EXOC8Q8IYI6 725 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 SPARTQ8N0X7 666 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 CPEB3Q8NE35 698 aaKnown RBP4.69□□□□□ -1.66
SKP1-212ENST00000523966 OR56A3Q8NH54 315 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 TMEM125Q96AQ2 219 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 BOD1Q96IK1 185 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 NELL2Q99435 816 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 TEX101Q9BY14 249 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 MAGEB5Q9BZ81 275 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 TRMT13Q9NUP7 481 aaKnown RBP4.69□□□□□ -1.66
SKP1-212ENST00000523966 GPRC5BQ9NZH0 403 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 FNIP2Q9P278 1114 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 MYO1AQ9UBC5 1043 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 MID2Q9UJV3 735 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 CHST2Q9Y4C5 530 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 RIPOR2Q9Y4F9 1068 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 PCDHGB2Q9Y5G2 931 aa4.69□□□□□ -1.66
SKP1-212ENST00000523966 A0A1W2PS29 197 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 HNRNPDLO14979 420 aaKnown RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 AREL1O15033 823 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 ADAMTS3O15072 1205 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 CCP110O43303 1012 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 CDKL5O76039 1030 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 SUN1O94901 812 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 RASAL1O95294 804 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 MYL4P12829 197 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 ACVR2AP27037 513 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 CD6P30203 668 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 PPM1AP35813 382 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 LILRA4P59901 499 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 GUCY1B3Q02153 619 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 TNFAIP2Q03169 654 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 PMS2P11Q13670 270 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 PDCD2Q16342 344 aaPredicted RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 GRAMD1BQ3KR37 738 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 CD300EQ496F6 205 aaPredicted RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 GAS2L3Q86XJ1 694 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 FANCBQ8NB91 859 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 ZNF483Q8TF39 744 aaPredicted RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 KIAA1191Q96A73 305 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 LRRC46Q96FV0 321 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 LTV1Q96GA3 475 aaPredicted RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 MESP1Q9BRJ9 268 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 PTDSS2Q9BVG9 487 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 ZNF768Q9H5H4 540 aaKnown RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 HEYLQ9NQ87 328 aaPredicted RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 XPNPEP3Q9NQH7 507 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 CTTNBP2NLQ9P2B4 639 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 TESQ9UGI8 421 aaKnown RBP4.68□□□□□ -1.66
SKP1-212ENST00000523966 TSC22D4Q9Y3Q8 395 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 SPATA31A3Q5VYP0 1347 aa4.68□□□□□ -1.66
SKP1-212ENST00000523966 A0A0B4J269 797 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 A0A1W2PPC4 97 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 AQP7P3A6NL99 342 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 GRXCR1A8MXD5 290 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 IFRD1O00458 451 aaPredicted RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 PEX11BO96011 259 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 BTF3P20290 206 aaKnown RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 EEF1GP26641 437 aaKnown RBP4.67□□□□□ -1.66
SKP1-212ENST00000523966 PRKAR1BP31321 381 aa4.67□□□□□ -1.66
SKP1-212ENST00000523966 PTGS2P35354 604 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms