RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 YY1P25490 414 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 ECE1P42892 770 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NEK3P51956 506 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 RHBDL3P58872 404 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 RTP1P59025 263 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 EIF3EP60228 445 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 SEPT6Q14141 434 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 MYBPC2Q14324 1141 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 CNPY1Q3B7I2 92 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 KRT80Q6KB66 452 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 PPP1R2P3Q6NXS1 205 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 SV2AQ7L0J3 742 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 OTOP1Q7RTM1 612 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 DRAXINQ8NBI3 349 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 TMEM35BQ8NCS4 154 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 DEPTORQ8TB45 409 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 DEPDC1BQ8WUY9 529 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NDUFA13Q9P0J0 144 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 CCPG1Q9ULG6 757 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NUP188Q5SRE5 1749 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 TJP1Q07157 1748 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 A0A1B0GVG6 124 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 LRRIQ4A6NIV6 560 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NOP56O00567 594 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 HNRNPRO43390 633 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 CALB1P05937 261 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 VCPP55072 806 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 TAS2R40P59535 323 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 MOGSQ13724 837 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 RARS2Q5T160 578 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 SCARA5Q6ZMJ2 495 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NDUFAF2Q8N183 169 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 FAM71DQ8N9W8 422 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 LINC00116Q8NCU8 138 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 TUBGCP5Q96RT8 1024 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 TIPINQ9BVW5 301 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 LAMB4A4D0S4 1761 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 KRT19P08727 400 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 SNRPAP09012 282 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 ARP10275 920 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 TPP2P29144 1249 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 COPAP53621 1224 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 FAAP100Q0VG06 881 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 RSPH3Q86UC2 560 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 NLRX1Q86UT6 975 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 ULK2Q8IYT8 1036 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 OR6Y1Q8NGX8 325 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 GDPD5Q8WTR4 605 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 PCDH9Q9HC56 1237 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 DDX56Q9NY93 547 aaKnown RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 ZHX2Q9Y6X8 837 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 SIPA1L3O60292 1781 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 LIASO43766 372 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 TMCC1O94876 653 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 VAV1P15498 845 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 GLRA2P23416 452 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 SHMT1P34896 483 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 ATXN3P54252 364 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 MTMR2Q13614 643 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 PLA2G4FQ68DD2 849 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 IYDQ6PHW0 289 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 SPOCD1Q6ZMY3 1216 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 NET1Q7Z628 596 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 RBM15BQ8NDT2 890 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 ACTL9Q8TC94 416 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 PTPRN2Q92932 1015 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 ITFG2Q969R8 447 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 APOPT1Q96IL0 206 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 MMADHCQ9H3L0 296 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 DDX4Q9NQI0 724 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 AVENQ9NQS1 362 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 NYAP2Q9P242 653 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 ZC3H7BQ9UGR2 993 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 NOCTQ9UK39 431 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 SOX13Q9UN79 622 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 BHMG1C9JSJ3 638 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 MTA2O94776 668 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 ZBED1O96006 694 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 HLA-DRAP01903 254 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 RBP3P10745 1247 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 EIF2AK2P19525 551 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 YWHABP31946 246 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 CDK7P50613 346 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 OTUD4Q01804 1114 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 RHBDF2Q6PJF5 856 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 GALNT4Q8N4A0 578 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 PSPC1Q8WXF1 523 aaKnown RBP9.44□□□□□ -0.9
CSMD1-212ENST00000523387 SLCO2A1Q92959 643 aa9.44□□□□□ -0.9
CSMD1-212ENST00000523387 CLMNQ96JQ2 1002 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms