RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CAMKK1Q8N5S9 505 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 KIF9Q9HAQ2 790 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 BLOC1S4Q9NUP1 217 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 TDP1Q9NUW8 608 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 TISP43B9A030 160 aa24.54■■□□□ 1.52
PVT1-218ENST00000523328 DDX6P26196 483 aaKnown RBP eCLIP24.54■■□□□ 1.52
PVT1-218ENST00000523328 BFSP1Q12934 665 aa24.54■■□□□ 1.52
PVT1-218ENST00000523328 TXNDC8Q6A555 127 aa24.54■■□□□ 1.52
PVT1-218ENST00000523328 TMLHEQ9NVH6 421 aa24.54■■□□□ 1.52
PVT1-218ENST00000523328 DPP3Q9NY33 737 aa24.54■■□□□ 1.52
PVT1-218ENST00000523328 CEP295Q9C0D2 2601 aa24.54■■□□□ 1.52
PVT1-218ENST00000523328 FRYQ5TBA9 3013 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 NUP205Q92621 2012 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 SLC26A4O43511 780 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 GALK1P51570 392 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 DHX8Q14562 1220 aaKnown RBP24.53■■□□□ 1.52
PVT1-218ENST00000523328 PLK5Q496M5 336 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 NAIF1Q69YI7 327 aaPredicted RBP24.53■■□□□ 1.52
PVT1-218ENST00000523328 STKLD1Q8NE28 680 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 AK8Q96MA6 479 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 HHIPQ96QV1 700 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 LSM14BQ9BX40 385 aaKnown RBP24.53■■□□□ 1.52
PVT1-218ENST00000523328 STYXL1Q9Y6J8 313 aa24.53■■□□□ 1.52
PVT1-218ENST00000523328 SOBPA7XYQ1 873 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 DRD1P21728 446 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 GPR15P49685 360 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 MON1AQ86VX9 555 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 EFCAB13Q8IY85 973 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 DCP1BQ8IZD4 617 aaKnown RBP24.52■■□□□ 1.52
PVT1-218ENST00000523328 DUSP15Q9H1R2 295 aaPredicted RBP24.52■■□□□ 1.52
PVT1-218ENST00000523328 VPS45Q9NRW7 570 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 PCDHB5Q9Y5E4 795 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 ANAPC1Q9H1A4 1944 aa24.52■■□□□ 1.52
PVT1-218ENST00000523328 KPNA7A9QM74 516 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 TADA3O75528 432 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 KCNK5O95279 499 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 GJA4P35212 333 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 AMPD2Q01433 879 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 MCM6Q14566 821 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 ZNF268Q14587 947 aaPredicted RBP24.51■■□□□ 1.51
PVT1-218ENST00000523328 ZC2HC1CQ53FD0 456 aaPredicted RBP24.51■■□□□ 1.51
PVT1-218ENST00000523328 ADALQ6DHV7 355 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 TCEAL6Q6IPX3 200 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 MRPS31Q92665 395 aaKnown RBP24.51■■□□□ 1.51
PVT1-218ENST00000523328 EZH1Q92800 747 aaPredicted RBP24.51■■□□□ 1.51
PVT1-218ENST00000523328 TCEAL3Q969E4 200 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 P2RY13Q9BPV8 354 aa24.51■■□□□ 1.51
PVT1-218ENST00000523328 AGO2Q9UKV8 859 aaKnown RBP24.51■■□□□ 1.51
PVT1-218ENST00000523328 ABCA7Q8IZY2 2146 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 CSH1P0DML2 217 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 CSH2P0DML3 217 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 ABCD1P33897 745 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 POU5F1Q01860 360 aaKnown RBP24.5■■□□□ 1.51
PVT1-218ENST00000523328 PDGFRLQ15198 375 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 FBXO43Q4G163 708 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 SDHAF4Q5VUM1 108 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 SLFN12LQ6IEE8 588 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 CC2D1AQ6P1N0 951 aaPredicted RBP24.5■■□□□ 1.51
PVT1-218ENST00000523328 CRELD2Q6UXH1 353 aaPredicted RBP24.5■■□□□ 1.51
PVT1-218ENST00000523328 CALML4Q96GE6 196 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 PI4K2AQ9BTU6 479 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 ZHX3Q9H4I2 956 aa24.5■■□□□ 1.51
PVT1-218ENST00000523328 MAGED2Q9UNF1 606 aaPredicted RBP24.5■■□□□ 1.51
PVT1-218ENST00000523328 UBA7P41226 1012 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 SV2CQ496J9 727 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 RNF43Q68DV7 783 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 SYT13Q7L8C5 426 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 RPLP0P6Q8NHW5 317 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 RAD54LQ92698 747 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 IKZF4Q9H2S9 585 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 ST6GALNAC4Q9H4F1 302 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 ECT2Q9H8V3 914 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 KIF3AQ9Y496 699 aa24.49■■□□□ 1.51
PVT1-218ENST00000523328 DCLK1O15075 740 aa24.48■■□□□ 1.51
PVT1-218ENST00000523328 PRPF40AO75400 957 aaKnown RBP24.48■■□□□ 1.51
PVT1-218ENST00000523328 KRT18P05783 430 aaKnown RBP24.48■■□□□ 1.51
PVT1-218ENST00000523328 PLCG1P19174 1290 aa24.48■■□□□ 1.51
PVT1-218ENST00000523328 TSPY1Q01534 308 aa24.48■■□□□ 1.51
PVT1-218ENST00000523328 FAM160A1Q05DH4 1040 aa24.48■■□□□ 1.51
PVT1-218ENST00000523328 MTF1Q14872 753 aa24.48■■□□□ 1.51
PVT1-218ENST00000523328 NFE2Q16621 373 aaPredicted RBP24.48■■□□□ 1.51
PVT1-218ENST00000523328 LEO1Q8WVC0 666 aaPredicted RBP24.48■■□□□ 1.51
PVT1-218ENST00000523328 EBF1Q9UH73 591 aa24.48■■□□□ 1.51
PVT1-218ENST00000523328 CACNA1GO43497 2377 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 TBCAO75347 108 aaKnown RBP24.47■■□□□ 1.51
PVT1-218ENST00000523328 NOL4O94818 638 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 ADSSP30520 456 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 KARSQ15046 597 aaKnown RBP24.47■■□□□ 1.51
PVT1-218ENST00000523328 ZNF77Q15935 545 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 NT5DC4Q86YG4 428 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 PDCL2Q8N4E4 241 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 CPA6Q8N4T0 437 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 OSCP1Q8WVF1 389 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 TRMT2BQ96GJ1 504 aaKnown RBP24.47■■□□□ 1.51
PVT1-218ENST00000523328 MYRFLQ96LU7 910 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 ZNF560Q96MR9 790 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 SLC22A12Q96S37 553 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 PPP4R2Q9NY27 417 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 THADAQ6YHU6 1953 aa24.47■■□□□ 1.51
PVT1-218ENST00000523328 HELZP42694 1942 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms