RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 USP35Q9P2H5 1018 aa3.62□□□□□ -1.83
PCM1-217ENST00000522998 SCAF8Q9UPN6 1271 aaKnown RBP3.62□□□□□ -1.83
PCM1-217ENST00000522998 FCHO1O14526 889 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 USP1O94782 785 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 ABLIM3O94929 683 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 CHRM3P20309 590 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 LIPAP38571 399 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 WASP42768 502 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 CLCN2P51788 898 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 GADL1Q6ZQY3 521 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 MAVSQ7Z434 540 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 DTX2Q86UW9 622 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 PPM1NQ8N819 430 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.61□□□□□ -1.83
PCM1-217ENST00000522998 CUL5Q93034 780 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 DAZAP1Q96EP5 407 aaKnown RBP3.61□□□□□ -1.83
PCM1-217ENST00000522998 CTAGE1Q96RT6 745 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 CNPPD1Q9BV87 410 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 FSD1LQ9BXM9 530 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 SAP30BPQ9UHR5 308 aaKnown RBP3.61□□□□□ -1.83
PCM1-217ENST00000522998 ADAMTS5Q9UNA0 930 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 PCDHA13Q9Y5I0 950 aa3.61□□□□□ -1.83
PCM1-217ENST00000522998 ZNF785A8K8V0 405 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 POC1B-GALNT4F8VUJ3 575 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 H7C1Q1 480 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 ADAM10O14672 748 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 SLC16A3O15427 465 aaKnown RBP3.6□□□□□ -1.83
PCM1-217ENST00000522998 SMAD6O43541 496 aaKnown RBP3.6□□□□□ -1.83
PCM1-217ENST00000522998 TLR5O60602 858 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 IL6RP08887 468 aaPredicted RBP3.6□□□□□ -1.83
PCM1-217ENST00000522998 NPSP0C0P6 89 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 PSMC1P62191 440 aaKnown RBP3.6□□□□□ -1.83
PCM1-217ENST00000522998 FAPQ12884 760 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 RAB39AQ14964 217 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 NPY5RQ15761 445 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 CCDC144BQ3MJ40 725 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 LEXMQ3ZCV2 418 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 ZNF628Q5EBL2 1059 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 TREML2Q5T2D2 321 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 FCRL6Q6DN72 434 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 PDSS2Q86YH6 399 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 GALNT4Q8N4A0 578 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 LRRC71Q8N4P6 559 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 AHCYL2Q96HN2 611 aaKnown RBP3.6□□□□□ -1.83
PCM1-217ENST00000522998 THOC3Q96J01 351 aaKnown RBP3.6□□□□□ -1.83
PCM1-217ENST00000522998 MDFICQ9P1T7 246 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 SH2B3Q9UQQ2 575 aa3.6□□□□□ -1.83
PCM1-217ENST00000522998 H3BNX3 289 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 GTPBP1O00178 669 aaKnown RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 DSCR3O14972 297 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 SGTAO43765 313 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 VPS4BO75351 444 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 CHEK2O96017 543 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 CRYABP02511 175 aaKnown RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 CHRM5P08912 532 aaPredicted RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 CYP2A6P11509 494 aaPredicted RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 AGXTP21549 392 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 ZNF135P52742 658 aaPredicted RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 PDE1AP54750 535 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 TLE1Q04724 770 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 ZNF268Q14587 947 aaPredicted RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 C10orf25Q5T742 122 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 BRD9Q9H8M2 597 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 ZNF277Q9NRM2 450 aaPredicted RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 TXLNGQ9NUQ3 528 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 POT1Q9NUX5 634 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 MRPS18AQ9NVS2 196 aaKnown RBP3.59□□□□□ -1.83
PCM1-217ENST00000522998 RAD54BQ9Y620 910 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 SQORQ9Y6N5 450 aa3.59□□□□□ -1.83
PCM1-217ENST00000522998 UBE2Q2LH0YL09 131 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 GCLCP48506 637 aaPredicted RBP3.58□□□□□ -1.84
PCM1-217ENST00000522998 HABP2Q14520 560 aaPredicted RBP3.58□□□□□ -1.84
PCM1-217ENST00000522998 CCDC93Q567U6 631 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 UBAP2Q5T6F2 1119 aaKnown RBP3.58□□□□□ -1.84
PCM1-217ENST00000522998 KIRREL2Q6UWL6 708 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 C18orf65Q6ZTR6 163 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 PARS2Q7L3T8 475 aaKnown RBP3.58□□□□□ -1.84
PCM1-217ENST00000522998 STRA8Q7Z7C7 330 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 KIAA0907Q7Z7F0 614 aaPredicted RBP3.58□□□□□ -1.84
PCM1-217ENST00000522998 HDAC10Q969S8 669 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 MRGPRX4Q96LA9 322 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 TRMOQ9BU70 441 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 TINAGL1Q9GZM7 467 aaPredicted RBP3.58□□□□□ -1.84
PCM1-217ENST00000522998 PIF1Q9H611 641 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 RLIMQ9NVW2 624 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 CALCOCO1Q9P1Z2 691 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 ICKQ9UPZ9 632 aa3.58□□□□□ -1.84
PCM1-217ENST00000522998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 BRINP1O60477 761 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 EXOC3O60645 756 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 GJB1P08034 283 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 GNAI3P08754 354 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 T-ENOLP0DO92 83 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 GNAI1P63096 354 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 RHDQ02161 417 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 GHRHRQ02643 423 aa3.57□□□□□ -1.84
PCM1-217ENST00000522998 MEX3CQ5U5Q3 659 aaKnown RBP3.57□□□□□ -1.84
PCM1-217ENST00000522998 SERPINA13PQ6UXR4 307 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms