RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 HTR4Q13639 388 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 ZNF699Q32M78 642 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 GRASPQ7Z6J2 395 aaPredicted RBP23.44■■□□□ 1.34
HOXA3-205ENST00000522456 DCP1BQ8IZD4 617 aaKnown RBP23.44■■□□□ 1.34
HOXA3-205ENST00000522456 GPT2Q8TD30 523 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 GPR152Q8TDT2 470 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 ACBD6Q9BR61 282 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 XYLT2Q9H1B5 865 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 TBC1D17Q9HA65 648 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 INSL5Q9Y5Q6 135 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 NUMBLQ9Y6R0 609 aa23.44■■□□□ 1.34
HOXA3-205ENST00000522456 STX10O60499 249 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 ACAT1P24752 427 aaKnown RBP23.43■■□□□ 1.34
HOXA3-205ENST00000522456 SGSM1Q2NKQ1 1148 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 TCERG1LQ5VWI1 586 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 TTI2Q6NXR4 508 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 LIMS2Q7Z4I7 341 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 LRRTM3Q86VH5 581 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 ATAD1Q8NBU5 361 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 SPATA18Q8TC71 538 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 CEP63Q96MT8 703 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 DUSP9Q99956 384 aaKnown RBP23.43■■□□□ 1.34
HOXA3-205ENST00000522456 ARHGEF3Q9NR81 526 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 SLC27A5Q9Y2P5 690 aa23.43■■□□□ 1.34
HOXA3-205ENST00000522456 ZFP37Q9Y6Q3 630 aaPredicted RBP23.43■■□□□ 1.34
HOXA3-205ENST00000522456 MTMR11A4FU01 709 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 GABRDO14764 452 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 VNN2O95498 520 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 GTF2H1P32780 548 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 PIK3CAP42336 1068 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 DCAF17Q5H9S7 520 aaPredicted RBP23.42■■□□□ 1.34
HOXA3-205ENST00000522456 ZNF667Q5HYK9 610 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 FILIP1Q7Z7B0 1213 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 OSTM1Q86WC4 334 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 SNX25Q9H3E2 840 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 SLC2A4RGQ9NR83 387 aa23.42■■□□□ 1.34
HOXA3-205ENST00000522456 ARMCX3Q9UH62 379 aaPredicted RBP23.42■■□□□ 1.34
HOXA3-205ENST00000522456 PTPRZ1P23471 2315 aaPredicted RBP23.41■■□□□ 1.34
HOXA3-205ENST00000522456 HLA-DRAP01903 254 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 PCSK1P29120 753 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 MCCD1P59942 119 aaPredicted RBP23.41■■□□□ 1.34
HOXA3-205ENST00000522456 TWF1Q12792 350 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 SMARCB1Q12824 385 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 PHLDB3Q6NSJ2 640 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 FOXR2Q6PJQ5 311 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 ELMOD1Q8N336 334 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 MLKLQ8NB16 471 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 ST13P5Q8NFI4 369 aaPredicted RBP23.41■■□□□ 1.34
HOXA3-205ENST00000522456 KBTBD7Q8WVZ9 684 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 TAF4BQ92750 862 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 ELMO3Q96BJ8 720 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 MRPL45Q9BRJ2 306 aaKnown RBP23.41■■□□□ 1.34
HOXA3-205ENST00000522456 CRISPLD1Q9H336 500 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 VRTNQ9H8Y1 702 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 TMEM8AQ9HCN3 771 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 HCFC1R1Q9NWW0 138 aa23.41■■□□□ 1.34
HOXA3-205ENST00000522456 TACC1O75410 805 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 PDGFRBP09619 1106 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 FAM163BP0C2L3 166 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 P4HA1P13674 534 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 PTPN2P17706 415 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 WARSP23381 471 aaKnown RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 LMO2P25791 158 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 GNL1P36915 607 aaPredicted RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 ALDH1A3P47895 512 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 NTHL1P78549 312 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 CCDC40Q4G0X9 1142 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 PABPC1LQ4VXU2 614 aaKnown RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 INTS6LQ5JSJ4 861 aaKnown RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 KRT39Q6A163 491 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 OR6B3Q8NGW1 331 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 TAS1R2Q8TE23 839 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 C2orf15Q8WU43 125 aaKnown RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 ZNF512Q96ME7 567 aaPredicted RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 IMPG2Q9BZV3 1241 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 METTL14Q9HCE5 456 aaKnown RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 DNMT3BQ9UBC3 853 aaKnown RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 RWDD2AQ9UIY3 292 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 GTF3C4Q9UKN8 822 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 CDH7Q9ULB5 785 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 YIPF1Q9Y548 306 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 RIF1Q5UIP0 2472 aaKnown RBP23.4■■□□□ 1.34
HOXA3-205ENST00000522456 FAM186AA6NE01 2351 aa23.4■■□□□ 1.34
HOXA3-205ENST00000522456 HCRTO43612 131 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 MBD3O95983 291 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 PLD1Q13393 1074 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 NFE2Q16621 373 aaPredicted RBP23.39■■□□□ 1.33
HOXA3-205ENST00000522456 IQCEQ6IPM2 695 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 TTC9BQ8N6N2 239 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 SPPL2BQ8TCT7 592 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 FGF14Q92915 247 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 SEPT5Q99719 369 aaPredicted RBP23.39■■□□□ 1.33
HOXA3-205ENST00000522456 CORO1BQ9BR76 489 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 PI4K2AQ9BTU6 479 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 SRRTQ9BXP5 876 aaKnown RBP23.39■■□□□ 1.33
HOXA3-205ENST00000522456 TMLHEQ9NVH6 421 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 ABI2Q9NYB9 513 aaPredicted RBP23.39■■□□□ 1.33
HOXA3-205ENST00000522456 HSFX1Q9UBD0 423 aa23.39■■□□□ 1.33
HOXA3-205ENST00000522456 PCDHB5Q9Y5E4 795 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms