RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 FAM114A1Q8IWE2 563 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 RNF168Q8IYW5 571 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 KLHL23Q8NBE8 558 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 C3orf58Q8NDZ4 430 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 EDARADDQ8WWZ3 215 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SLC35C1Q96A29 364 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 C11orf84Q9BUA3 381 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 MTMR12Q9C0I1 747 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 HSD3B7Q9H2F3 369 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 FANCLQ9NW38 375 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 MARCH5Q9NX47 278 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 CACNG4Q9UBN1 327 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 SIX4Q9UIU6 781 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 GDF2Q9UK05 429 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 ADAM28Q9UKQ2 775 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 ZNF232Q9UNY5 417 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 LZTS1Q9Y250 596 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 COQ4Q9Y3A0 265 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 ANK1P16157 1881 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 RALGAPA2Q2PPJ7 1873 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 GBF1Q92538 1859 aa8.99□□□□□ -0.97
VPS13B-210ENST00000521932 TDRD15B5MCY1 1934 aaKnown RBP8.99□□□□□ -0.97
VPS13B-210ENST00000521932 PDCD11Q14690 1871 aaKnown RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 F8W810 466 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 P4HA2O15460 535 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TRAPPC3O43617 180 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TADA2AO75478 443 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 KIF4AO95239 1232 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 ITGB3P05106 788 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 ITGB1P05556 798 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 ZNF18P17022 549 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 IGFBP6P24592 240 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 EEF1GP26641 437 aaKnown RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 CTNNB1P35222 781 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 PNPLA4P41247 253 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 GUCY2FP51841 1108 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 LILRA4P59901 499 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 RBP5P82980 135 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 KRT17Q04695 432 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 UBE3AQ05086 875 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 CCDC40Q4G0X9 1142 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TCP11X2Q5H9J9 407 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TDRD10Q5VZ19 366 aaKnown RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 KRT39Q6A163 491 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 LRRC69Q6ZNQ3 347 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 DDX53Q86TM3 631 aaKnown RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 GPR65Q8IYL9 337 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM130Q8N3G9 435 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 LRRC52Q8N7C0 313 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 GOLGA6L1Q8N7Z2 621 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 SPPL3Q8TCT6 385 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 BCL7CQ8WUZ0 217 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 RABGGTAQ92696 567 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM169Q96HH4 297 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 CNOT6LQ96LI5 555 aaKnown RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TTYH1Q9H313 450 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 CBX8Q9HC52 389 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM8AQ9HCN3 771 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 CHST7Q9NS84 486 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 PUF60Q9UHX1 559 aaKnown RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 AGAP1Q9UPQ3 857 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 PRG3Q9Y2Y8 225 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 DNMT3AQ9Y6K1 912 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-210ENST00000521932 SZT2Q5T011 3432 aa8.98□□□□□ -0.97
VPS13B-210ENST00000521932 KPNA7A9QM74 516 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 KCNJ18B7U540 433 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 M0QZQ0 153 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 PPEF2O14830 753 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 LPXNO60711 386 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 VNN1O95497 513 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 SOD2P04179 222 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 TRIM49P0CI25 452 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 TRIM49CP0CI26 452 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 ARAFP10398 606 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 POU3F3P20264 500 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-210ENST00000521932 POLR2BP30876 1174 aaKnown RBP8.97□□□□□ -0.97
VPS13B-210ENST00000521932 ATICP31939 592 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 GCLMP48507 274 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 FMO5P49326 533 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 TAF6P49848 677 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 PSMA6P60900 246 aaKnown RBP8.97□□□□□ -0.97
VPS13B-210ENST00000521932 ELAVL2Q12926 359 aaKnown RBP8.97□□□□□ -0.97
VPS13B-210ENST00000521932 GPM6BQ13491 265 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 CAMK1Q14012 370 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 KCNJ12Q14500 433 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 SGSM1Q2NKQ1 1148 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 CBWD6Q4V339 395 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 TIGD5Q53EQ6 642 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 DCAF17Q5H9S7 520 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-210ENST00000521932 CBWD3Q5JTY5 395 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 MIIPQ5JXC2 388 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 CBWD5Q5RIA9 395 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 TCERG1LQ5VWI1 586 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 FUT10Q6P4F1 479 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 LIMS2Q7Z4I7 341 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 AOPEPQ8N6M6 819 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 FBXL13Q8NEE6 735 aa8.97□□□□□ -0.97
VPS13B-210ENST00000521932 ARNTL2Q8WYA1 636 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms