RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 F11P03951 625 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 KRT19P08727 400 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 CXCL12P48061 93 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 GPR15P49685 360 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 NLRP12P59046 1061 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 RBP5P82980 135 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 MYL7Q01449 175 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 WDR44Q5JSH3 913 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 CMTM8Q8IZV2 173 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 SPEM1Q8N4L4 309 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 CELF5Q8N6W0 485 aaKnown RBP21.12■□□□□ 0.97
PABPC1-215ENST00000520804 SPATA18Q8TC71 538 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 MTMR12Q9C0I1 747 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 LRRC27Q9C0I9 530 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 RBM12Q9NTZ6 932 aaKnown RBP21.12■□□□□ 0.97
PABPC1-215ENST00000520804 KBTBD4Q9NVX7 518 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 SIX4Q9UIU6 781 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 SNX9Q9Y5X1 595 aa21.12■□□□□ 0.97
PABPC1-215ENST00000520804 WDR87Q6ZQQ6 2873 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 SPTLC2O15270 562 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 PPP6R2O75170 966 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 TMEM191BP0C7N4 346 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 ACAT1P24752 427 aaKnown RBP21.11■□□□□ 0.97
PABPC1-215ENST00000520804 DDX6P26196 483 aaKnown RBP eCLIP21.11■□□□□ 0.976e-38■□□□□ 11.3
PABPC1-215ENST00000520804 SATB1Q01826 763 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 TNK2Q07912 1038 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 E2F4Q16254 413 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 INTS6LQ5JSJ4 861 aaKnown RBP21.11■□□□□ 0.97
PABPC1-215ENST00000520804 DGKKQ5KSL6 1271 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 STXBP4Q6ZWJ1 553 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 TOP6BLQ8N6T0 577 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 GLIS3Q8NEA6 775 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 SECISBP2LQ93073 1101 aaKnown RBP21.11■□□□□ 0.97
PABPC1-215ENST00000520804 HPS3Q969F9 1004 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 PKMYT1Q99640 499 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 CUEDC2Q9H467 287 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 ABCB6Q9NP58 842 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 THG1LQ9NWX6 298 aaKnown RBP21.11■□□□□ 0.97
PABPC1-215ENST00000520804 DENND4CQ5VZ89 1909 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 FRYLO94915 3013 aa21.11■□□□□ 0.97
PABPC1-215ENST00000520804 KIF26AQ9ULI4 1882 aaPredicted RBP21.1■□□□□ 0.97
PABPC1-215ENST00000520804 SOBPA7XYQ1 873 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 CSH1P0DML2 217 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 CSH2P0DML3 217 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 OSTM1Q86WC4 334 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 GPR161Q8N6U8 529 aaKnown RBP21.1■□□□□ 0.97
PABPC1-215ENST00000520804 MAB21L3Q8N8X9 362 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 ZNF396Q96N95 335 aaPredicted RBP21.1■□□□□ 0.97
PABPC1-215ENST00000520804 TRIM9Q9C026 710 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 INTS13Q9NVM9 706 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 TFIP11Q9UBB9 837 aaKnown RBP21.1■□□□□ 0.97
PABPC1-215ENST00000520804 GTF3C4Q9UKN8 822 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 MAGED2Q9UNF1 606 aaPredicted RBP21.1■□□□□ 0.97
PABPC1-215ENST00000520804 GPR179Q6PRD1 2367 aa21.1■□□□□ 0.97
PABPC1-215ENST00000520804 OBSL1O75147 1896 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 PTPRJQ12913 1337 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 DMXL1Q9Y485 3027 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 ZNF233A6NK53 670 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 GABRDO14764 452 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 CYP2F1P24903 491 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 HOXD13P35453 343 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 AVPR1AP37288 418 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 LHX1P48742 406 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 RPL10AP62906 217 aaKnown RBP21.09■□□□□ 0.97
PABPC1-215ENST00000520804 PUM1Q14671 1186 aaKnown RBP eCLIP21.09■□□□□ 0.97
PABPC1-215ENST00000520804 PON2Q15165 354 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 DDR2Q16832 855 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 SOWAHAQ2M3V2 549 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 ITPRIPL2Q3MIP1 535 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 SDHAF4Q5VUM1 108 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 LMBRD2Q68DH5 695 aaPredicted RBP21.09■□□□□ 0.97
PABPC1-215ENST00000520804 Q6ZS52 159 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 CBWD2Q8IUF1 395 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 ADGRF2Q8IZF7 708 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 STKLD1Q8NE28 680 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 USP13Q92995 863 aaPredicted RBP21.09■□□□□ 0.97
PABPC1-215ENST00000520804 ANKRD36BP1Q96IX9 119 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 FAM83CQ9BQN1 747 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 GKN1Q9NS71 199 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 CCL26Q9Y258 94 aa21.09■□□□□ 0.97
PABPC1-215ENST00000520804 NOL4O94818 638 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 PAPSS2O95340 614 aaPredicted RBP21.08■□□□□ 0.97
PABPC1-215ENST00000520804 YEATS4O95619 227 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 PCSK1P29120 753 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 AMPD3Q01432 767 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 MYO1EQ12965 1108 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 CCINQ13939 588 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 SURF1Q15526 300 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 CFAP221Q4G0U5 840 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 TXNDC8Q6A555 127 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 CNNM4Q6P4Q7 775 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 DPH6Q7L8W6 267 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 MON1AQ86VX9 555 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 OR5B17Q8NGF7 314 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 MRPS31Q92665 395 aaKnown RBP21.08■□□□□ 0.97
PABPC1-215ENST00000520804 DHX58Q96C10 678 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 KIF9Q9HAQ2 790 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 TDP1Q9NUW8 608 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 DLL3Q9NYJ7 618 aa21.08■□□□□ 0.97
PABPC1-215ENST00000520804 HSPBP1Q9NZL4 362 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms