RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 NDC80O14777 642 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 STK10O94804 968 aaKnown RBP10.69□□□□□ -0.7
MCF2-209ENST00000520602 CTSHP09668 335 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 RFC1P35251 1148 aaPredicted RBP10.69□□□□□ -0.7
MCF2-209ENST00000520602 CENPCQ03188 943 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 SYDE1Q6ZW31 735 aaPredicted RBP10.69□□□□□ -0.7
MCF2-209ENST00000520602 TAS1R3Q7RTX0 852 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 KIAA0319LQ8IZA0 1049 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 MREGQ8N565 214 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 CCDC33Q8N5R6 958 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 MYCBPAPQ8TBZ2 947 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 LRRC8CQ8TDW0 803 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 FBXL18Q96ME1 805 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 DNPEPQ9ULA0 475 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 ADAMTSL1Q8N6G6 1762 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 VNN1O95497 513 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 C6orf222P0C671 652 aaPredicted RBP10.69□□□□□ -0.7
MCF2-209ENST00000520602 ARL4AP40617 200 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 GTF2A2P52657 109 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 HUNKP57058 714 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 GRIK4Q16099 956 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 CCNG2Q16589 344 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 HIF1AQ16665 826 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 GOLGA7BQ2TAP0 167 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 SPOCD1Q6ZMY3 1216 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 SIX6OS1Q8N1H7 587 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 FAM71DQ8N9W8 422 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 RAPGEF5Q92565 580 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 TMEM176AQ96HP8 235 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 PARK7Q99497 189 aaKnown RBP10.69□□□□□ -0.7
MCF2-209ENST00000520602 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
MCF2-209ENST00000520602 GPATCH2LQ9NWQ4 482 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 SNTG2Q9NY99 539 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 LCMT1Q9UIC8 334 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 TPX2Q9ULW0 747 aaKnown RBP10.69□□□□□ -0.7
MCF2-209ENST00000520602 STK38LQ9Y2H1 464 aa10.69□□□□□ -0.7
MCF2-209ENST00000520602 SUN1O94901 812 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 NDST1P52848 882 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 TFDP3Q5H9I0 405 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 TADA2BQ86TJ2 420 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 ACTL9Q8TC94 416 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 VCPIP1Q96JH7 1222 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 BAIAP2L1Q9UHR4 511 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 R3HDM2Q9Y2K5 976 aaKnown RBP10.68□□□□□ -0.7
MCF2-209ENST00000520602 PTPRJQ12913 1337 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 TMEM120BA0PK00 339 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 GOLGA8RI6L899 631 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 RIPK2O43353 540 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 AKAP5P24588 427 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 PSMC4P43686 418 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 OTUD4Q01804 1114 aaKnown RBP10.68□□□□□ -0.7
MCF2-209ENST00000520602 NOL9Q5SY16 702 aaKnown RBP10.68□□□□□ -0.7
MCF2-209ENST00000520602 DSTYKQ6XUX3 929 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 PLPPR4Q7Z2D5 763 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 C4orf33Q8N1A6 199 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 UBXN6Q9BZV1 441 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 PCYOX1Q9UHG3 505 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 INPP5FQ9Y2H2 1132 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 ZNF831Q5JPB2 1677 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 TCP11X1B4DZS4 312 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 LSM8O95777 96 aaKnown RBP10.68□□□□□ -0.7
MCF2-209ENST00000520602 FAM107AO95990 144 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 ETS1P14921 441 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 MAGEA9P43362 315 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 PLEKHH3Q7Z736 793 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 ZNF518BQ9C0D4 1074 aa10.68□□□□□ -0.7
MCF2-209ENST00000520602 TNPO2O14787 897 aaKnown RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 MT-ND3P03897 115 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 ROR1Q01973 937 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 LGSNQ5TDP6 509 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 FYB2Q5VWT5 728 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 USP50Q70EL3 339 aaPredicted RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 GBA2Q9HCG7 927 aaPredicted RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 WHRNQ9P202 907 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 PGAP2Q9UHJ9 254 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 TMEM59LQ9UK28 342 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 A0A0G2JLL6 359 aaPredicted RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 O00370 1275 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 KCNN4O15554 427 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 CREB3O43889 395 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 CDH16O75309 829 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 CPP00450 1065 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 ZNF157P51786 506 aaPredicted RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 WNT7BP56706 349 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 NME3Q13232 169 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 FAXCQ5TGI0 409 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 PRRT2Q7Z6L0 340 aaPredicted RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 TMEM192Q8IY95 271 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 EIF1ADQ8N9N8 165 aaKnown RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 SYT17Q9BSW7 474 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 PITPNM3Q9BZ71 974 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 DLEC1Q9Y238 1755 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 GPR25O00155 361 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 FSCN2O14926 492 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
MCF2-209ENST00000520602 GPD1P21695 349 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 PEX5P50542 639 aa10.67□□□□□ -0.7
MCF2-209ENST00000520602 RSPH3Q86UC2 560 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms