RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 AFF4Q9UHB7 1163 aaKnown RBP4.06□□□□□ -1.76
HMGB1P41-201ENST00000520234 A0A087WWL8 130 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 PIPSLA2A3N6 862 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 TRIM43BA6NCK2 446 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 TRIAP1O43715 76 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 PQBP1O60828 265 aaKnown RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 MAP4K4O95819 1239 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 ADH4P08319 380 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 NBPF7P0C2Y1 421 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 ITGALP20701 1170 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 UCP3P55916 312 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC13A2Q13183 592 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 PICALMQ13492 652 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 IQCB1Q15051 598 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 GEN1Q17RS7 908 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 PREPLQ4J6C6 727 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 TAF2Q6P1X5 1199 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 LAYNQ6UX15 382 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 ADGRG5Q8IZF4 528 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 DNAJC5GQ8N7S2 189 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 NSUN7Q8NE18 718 aaKnown RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 SNX19Q92543 992 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 TRIM43Q96BQ3 446 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 MSLNLQ96KJ4 702 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 STRBPQ96SI9 672 aaKnown RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 OSBPL9Q96SU4 736 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 NELL2Q99435 816 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 UNKQ9C0B0 810 aaKnown RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 SERHL2Q9H4I8 314 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 UNKLQ9H9P5 680 aaKnown RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 SMURF2Q9HAU4 748 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 A1CFQ9NQ94 594 aaKnown RBP4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 INTS13Q9NVM9 706 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 XPR1Q9UBH6 696 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 CPNE7Q9UBL6 633 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 SHOC2Q9UQ13 582 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 DMTF1Q9Y222 760 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 PCDHGB6Q9Y5F9 930 aa4.05□□□□□ -1.76
HMGB1P41-201ENST00000520234 UNC119BA6NIH7 251 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 APAF1O14727 1248 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 LPXNO60711 386 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 VPS4BO75351 444 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZFPL1O95159 310 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 SRGNP10124 158 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 EGR2P11161 476 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 NPTX2P47972 431 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 GCLCP48506 637 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 NDUFV1P49821 464 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 TOB1P50616 345 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 CTBP1Q13363 440 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 TP53BP2Q13625 1128 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 CD300EQ496F6 205 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 SFRP4Q6FHJ7 346 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC30A10Q6XR72 485 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 CCDC146Q8IYE0 955 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC15A4Q8N697 577 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 TMEM125Q96AQ2 219 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 PTCD3Q96EY7 689 aaKnown RBP4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZC3H10Q96K80 434 aaKnown RBP4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 COQ10AQ96MF6 247 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC46A1Q96NT5 459 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 PRRX2Q99811 253 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 WDR11Q9BZH6 1224 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZNF700Q9H0M5 742 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 SACM1LQ9NTJ5 587 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZSCAN32Q9NX65 697 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 ANKFY1Q9P2R3 1169 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 FAM50BQ9Y247 325 aa4.04□□□□□ -1.76
HMGB1P41-201ENST00000520234 A0A0B4J269 797 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MBD3L4A6NDZ8 208 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MBD3L3A6NE82 208 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 RHPN2P1A8MT19 583 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 F5H697 171 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 PMM2O15305 246 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 HKR1P10072 659 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 SLC5A1P13866 664 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 ZKSCAN1P17029 563 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 KLRC1P26715 233 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 LRPAP1P30533 357 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 AVPR1BP47901 424 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 LOXL3P58215 753 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MC2RQ01718 297 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 SCAPQ12770 1279 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 IFIT5Q13325 482 aaKnown RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 TUBB3Q13509 450 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 HDAC1Q13547 482 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MAP9Q49MG5 647 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 GPR149Q86SP6 731 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 GAS2L3Q86XJ1 694 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 LDLRAD3Q86YD5 345 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 ULK2Q8IYT8 1036 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 LCORLQ8N3X6 602 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 LNX2Q8N448 690 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 NEU4Q8WWR8 484 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MAML1Q92585 1016 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MESP1Q9BRJ9 268 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 ANP32EQ9BTT0 268 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MLST8Q9BVC4 326 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 PTDSS2Q9BVG9 487 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms