RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 GDE1Q9NZC3 331 aa19.68■□□□□ 0.74
SREK1-207ENST00000520058 MAGEC2Q9UBF1 373 aaPredicted RBP19.68■□□□□ 0.74
SREK1-207ENST00000520058 GTF3C4Q9UKN8 822 aa19.68■□□□□ 0.74
SREK1-207ENST00000520058 ASS1P00966 412 aaKnown RBP19.67■□□□□ 0.74
SREK1-207ENST00000520058 PDGFRBP09619 1106 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 HAPLN1P10915 354 aaPredicted RBP19.67■□□□□ 0.74
SREK1-207ENST00000520058 MYL4P12829 197 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 CD44P16070 742 aaKnown RBP19.67■□□□□ 0.74
SREK1-207ENST00000520058 PMS1P54277 932 aaKnown RBP19.67■□□□□ 0.74
SREK1-207ENST00000520058 WDR44Q5JSH3 913 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 SCARA3Q6AZY7 606 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 ZC3H3Q8IXZ2 948 aaKnown RBP19.67■□□□□ 0.74
SREK1-207ENST00000520058 FBXL13Q8NEE6 735 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 FEZF2Q8TBJ5 459 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 KBTBD7Q8WVZ9 684 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 EDAQ92838 391 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 FGF13Q92913 245 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 PSMG2Q969U7 264 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 MYADMQ96S97 322 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 EPHX3Q9H6B9 360 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 CEP72Q9P209 647 aa19.67■□□□□ 0.74
SREK1-207ENST00000520058 N4BP1O75113 896 aaKnown RBP19.66■□□□□ 0.74
SREK1-207ENST00000520058 VNN1O95497 513 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 MCCD1P59942 119 aaPredicted RBP19.66■□□□□ 0.74
SREK1-207ENST00000520058 CYP27A1Q02318 531 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 PPP3CAQ08209 521 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 TDGQ13569 410 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 CFAP221Q4G0U5 840 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 OSTM1Q86WC4 334 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 TTC39CQ8N584 583 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 PI4K2AQ9BTU6 479 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 KCNK12Q9HB15 430 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 ATP8B3O60423 1300 aa19.66■□□□□ 0.74
SREK1-207ENST00000520058 GREB1Q4ZG55 1949 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 VNN2O95498 520 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 MBD3O95983 291 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 CCDC192P0DO97 292 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 BMP6P22004 513 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 LMO2P25791 158 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 ANXA13P27216 316 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 NOP14P78316 857 aaKnown RBP19.65■□□□□ 0.74
SREK1-207ENST00000520058 ZXDAP98168 799 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 TPD52L1Q16890 204 aaPredicted RBP19.65■□□□□ 0.74
SREK1-207ENST00000520058 ARHGAP15Q53QZ3 475 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 TMEM31Q5JXX7 168 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 C1orf220Q5T0J3 134 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 TTI2Q6NXR4 508 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 FAM171BQ6P995 826 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 VSTM1Q6UX27 236 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 DNAJB7Q7Z6W7 309 aaPredicted RBP19.65■□□□□ 0.74
SREK1-207ENST00000520058 MYCBPAPQ8TBZ2 947 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 FAXDC2Q96IV6 333 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 MRPL45Q9BRJ2 306 aaKnown RBP19.65■□□□□ 0.74
SREK1-207ENST00000520058 CRISPLD1Q9H336 500 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 CYP3A43Q9HB55 503 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 EHD2Q9NZN4 543 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 RWDD2AQ9UIY3 292 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 ZMYM5Q9UJ78 669 aa19.65■□□□□ 0.74
SREK1-207ENST00000520058 MYBPHLA2RUH7 354 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 CSH1P0DML2 217 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 CSH2P0DML3 217 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 PTPN1P18031 435 aaKnown RBP19.64■□□□□ 0.73
SREK1-207ENST00000520058 MAGEA11P43364 429 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 EPHA5P54756 1037 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 STX17P56962 302 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 PSMC1P62191 440 aaKnown RBP19.64■□□□□ 0.73
SREK1-207ENST00000520058 SIGLEC14Q08ET2 396 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 SCARA5Q6ZMJ2 495 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 UNC93AQ86WB7 457 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 ITFG1Q8TB96 612 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 TAS1R2Q8TE23 839 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 ING5Q8WYH8 240 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 KHSRPQ92945 711 aaKnown RBP eCLIP19.64■□□□□ 0.731e-9■■□□□ 12.7
SREK1-207ENST00000520058 CEP295NLQ96MC4 621 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 SLITRK6Q9H5Y7 841 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 TMLHEQ9NVH6 421 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 RAB20Q9NX57 234 aa19.64■□□□□ 0.73
SREK1-207ENST00000520058 UXTQ9UBK9 157 aaPredicted RBP19.64■□□□□ 0.73
SREK1-207ENST00000520058 NUP210Q8TEM1 1887 aaPredicted RBP19.64■□□□□ 0.73
SREK1-207ENST00000520058 OBSL1O75147 1896 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 TRIM66O15016 1216 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 GPR37L1O60883 481 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 SOAT2O75908 522 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 ASGR2P07307 311 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 CYP2F1P24903 491 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 CDC25CP30307 473 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 GRIK1P39086 918 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 PRSS36Q5K4E3 855 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 NPAS3Q8IXF0 933 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 TTC9BQ8N6N2 239 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 B3GALNT2Q8NCR0 500 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 MYLPFQ96A32 169 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 MCRS1Q96EZ8 462 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 PKMYT1Q99640 499 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 SRRTQ9BXP5 876 aaKnown RBP19.63■□□□□ 0.73
SREK1-207ENST00000520058 NIF3L1Q9GZT8 377 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 FAM124BQ9H5Z6 455 aaPredicted RBP19.63■□□□□ 0.73
SREK1-207ENST00000520058 SMYD3Q9H7B4 428 aa19.63■□□□□ 0.73
SREK1-207ENST00000520058 CDH8P55286 799 aa19.62■□□□□ 0.73
SREK1-207ENST00000520058 YWHAEP62258 255 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms