RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 FOXD4L3Q6VB84 417 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-220ENST00000519767 CBWD2Q8IUF1 395 aa27.2■■□□□ 1.94
VEGFA-220ENST00000519767 NDRG2Q9UN36 371 aaKnown RBP27.2■■□□□ 1.94
VEGFA-220ENST00000519767 CSH1P0DML2 217 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 CSH2P0DML3 217 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 CDR1P51861 262 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 PLCB2Q00722 1185 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 INTS6LQ5JSJ4 861 aaKnown RBP27.19■■□□□ 1.94
VEGFA-220ENST00000519767 RESP18Q5W5W9 173 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 WDR49Q8IV35 697 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 ATRIPQ8WXE1 791 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 HPDLQ96IR7 371 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 FAM126AQ9BYI3 521 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-220ENST00000519767 TMLHEQ9NVH6 421 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 THG1LQ9NWX6 298 aaKnown RBP27.19■■□□□ 1.94
VEGFA-220ENST00000519767 CGNQ9P2M7 1197 aaKnown RBP27.19■■□□□ 1.94
VEGFA-220ENST00000519767 RCOR1Q9UKL0 485 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 PCDHGA2Q9Y5H1 932 aa27.19■■□□□ 1.94
VEGFA-220ENST00000519767 UBE4BO95155 1302 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 GABRDO14764 452 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 KINO60870 393 aaKnown RBP27.18■■□□□ 1.94
VEGFA-220ENST00000519767 DDX6P26196 483 aaKnown RBP eCLIP27.18■■□□□ 1.945e-8■□□□□ 10.5
VEGFA-220ENST00000519767 KPNA1P52294 538 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-220ENST00000519767 EHHADHQ08426 723 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 HS2ST1Q7LGA3 356 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 GPIHBP1Q8IV16 184 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 CELF5Q8N6W0 485 aaKnown RBP27.18■■□□□ 1.94
VEGFA-220ENST00000519767 PI4K2AQ9BTU6 479 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 SLC46A2Q9BY10 475 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 CHRDQ9H2X0 955 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 LMAN1LQ9HAT1 526 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 AGPAT3Q9NRZ7 376 aa27.18■■□□□ 1.94
VEGFA-220ENST00000519767 TGFB1I1O43294 461 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 HMGA1P17096 107 aaKnown RBP27.17■■□□□ 1.94
VEGFA-220ENST00000519767 CCNE1P24864 410 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 MTAPQ13126 283 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 PPP2R5DQ14738 602 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 SNRNP35Q16560 246 aaKnown RBP27.17■■□□□ 1.94
VEGFA-220ENST00000519767 SOWAHAQ2M3V2 549 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 LIMS2Q7Z4I7 341 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 ADGRF2Q8IZF7 708 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 CMTM8Q8IZV2 173 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 OR5B17Q8NGF7 314 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 BPIFB1Q8TDL5 484 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 LRRC3BQ96PB8 259 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 ZSCAN32Q9NX65 697 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 GTF3C4Q9UKN8 822 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 MIA3Q5JRA6 1907 aa27.17■■□□□ 1.94
VEGFA-220ENST00000519767 NCANO14594 1321 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 F11P03951 625 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 NLRP12P59046 1061 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 CYP4F8P98187 520 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 CFAP221Q4G0U5 840 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 SCARA3Q6AZY7 606 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 RALGPS2Q86X27 583 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-220ENST00000519767 XXYLT1Q8NBI6 393 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 SCFD1Q8WVM8 642 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 FUBP3Q96I24 572 aaKnown RBP eCLIP27.16■■□□□ 1.94
VEGFA-220ENST00000519767 FNBP1Q96RU3 617 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 PKMYT1Q99640 499 aa27.16■■□□□ 1.94
VEGFA-220ENST00000519767 PRMT8Q9NR22 394 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-220ENST00000519767 UXTQ9UBK9 157 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-220ENST00000519767 COL4A3Q01955 1670 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 FAM163BP0C2L3 166 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 ACAT1P24752 427 aaKnown RBP27.15■■□□□ 1.94
VEGFA-220ENST00000519767 CYP2F1P24903 491 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 AVPR1AP37288 418 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 NRLP54845 237 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 LMBRD2Q68DH5 695 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-220ENST00000519767 SPATA2LQ8IUW3 424 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-220ENST00000519767 CEP57L1Q8IYX8 460 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 RDH13Q8NBN7 331 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 ZBTB44Q8NCP5 570 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 MRPS31Q92665 395 aaKnown RBP27.15■■□□□ 1.94
VEGFA-220ENST00000519767 NELL1Q92832 810 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 FAM84AQ96KN4 292 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 TSC2P49815 1807 aa27.15■■□□□ 1.94
VEGFA-220ENST00000519767 MYBPHLA2RUH7 354 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 TNNI1P19237 187 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 LRRC32Q14392 662 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 PSMD6Q15008 389 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 MAPRE1Q15691 268 aaKnown RBP27.14■■□□□ 1.94
VEGFA-220ENST00000519767 BMT2Q1RMZ1 405 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 FAM171BQ6P995 826 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 C4orf50Q6ZRC1 276 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 TRAPPC11Q7Z392 1133 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 TMEM150AQ86TG1 271 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 OSTM1Q86WC4 334 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 TRMT2BQ96GJ1 504 aaKnown RBP27.14■■□□□ 1.94
VEGFA-220ENST00000519767 MYRFLQ96LU7 910 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 BLZF1Q9H2G9 400 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 CDH9Q9ULB4 789 aa27.14■■□□□ 1.94
VEGFA-220ENST00000519767 PTPRJQ12913 1337 aa27.14■■□□□ 1.93
VEGFA-220ENST00000519767 PRAMEF12O95522 483 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 SLFN14P0C7P3 912 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 CHRNB1P11230 501 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 MAGEA11P43364 429 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 AFMP43652 599 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 DNM1Q05193 864 aaKnown RBP27.13■■□□□ 1.93
VEGFA-220ENST00000519767 DDR2Q16832 855 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms