RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 TMEFF2Q9UIK5 374 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-203ENST00000518638 MRPL42Q9Y6G3 142 aaKnown RBP7.04□□□□□ -1.28
CCDC6-203ENST00000518638 TTC3P53804 2025 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 DCHS1Q96JQ0 3298 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 KIAA1671Q9BY89 1806 aa7.04□□□□□ -1.28
CCDC6-203ENST00000518638 SUV39H1O43463 412 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 NPHS1O60500 1241 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 CSPG5O95196 566 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 PDGFBP01127 241 aaPredicted RBP7.03□□□□□ -1.28
CCDC6-203ENST00000518638 SMIM10L2AP0DMW4 78 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 SMIM10L2BP0DMW5 78 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 HSPD1P10809 573 aaKnown RBP7.03□□□□□ -1.28
CCDC6-203ENST00000518638 AOC1P19801 751 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 SLC16A2P36021 539 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 NOVP48745 357 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 PLP2Q04941 152 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 ANGPT1Q15389 498 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 DUSP6Q16828 381 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 ST3GAL2Q16842 350 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 INF2Q27J81 1249 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 CELF3Q5SZQ8 465 aaKnown RBP7.03□□□□□ -1.28
CCDC6-203ENST00000518638 DENND5AQ6IQ26 1287 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 ADGRD2Q7Z7M1 963 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 CCDC103Q8IW40 242 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 PPIL6Q8IXY8 311 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 CCDC105Q8IYK2 499 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 SAMD3Q8N6K7 520 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 TDRD5Q8NAT2 981 aaKnown RBP7.03□□□□□ -1.28
CCDC6-203ENST00000518638 ATP8B4Q8TF62 1192 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 RUBCNQ92622 972 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 OSBP2Q969R2 916 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 ADAM7Q9H2U9 754 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
CCDC6-203ENST00000518638 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
CCDC6-203ENST00000518638 LZTS1Q9Y250 596 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 MYRFQ9Y2G1 1151 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 MRPL11Q9Y3B7 192 aaKnown RBP7.03□□□□□ -1.28
CCDC6-203ENST00000518638 SQORQ9Y6N5 450 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 MYO15AQ9UKN7 3530 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 KAT6AQ92794 2004 aa7.03□□□□□ -1.28
CCDC6-203ENST00000518638 NRCAMQ92823 1304 aa7.02□□□□□ -1.28
CCDC6-203ENST00000518638 GVINP1Q7Z2Y8 2422 aa7.02□□□□□ -1.28
CCDC6-203ENST00000518638 HRKO00198 91 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 ARNTLO00327 626 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 ENPP3O14638 875 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 RNF113AO15541 343 aaKnown RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 PRODHO43272 600 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 GGPS1O95749 300 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 PDHBP11177 359 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 PABPC1P11940 636 aaKnown RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 MTHFRP42898 656 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 NT5C2P49902 561 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 ZNF543Q08ER8 600 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 LONRF2Q1L5Z9 754 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 HSDL1Q3SXM5 330 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 USH1GQ495M9 461 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 YOD1Q5VVQ6 348 aaPredicted RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 ANKRD54Q6NXT1 300 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 TSHZ1Q6ZSZ6 1077 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 KIAA2013Q8IYS2 634 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 DIO2Q92813 273 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 CASP10Q92851 521 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 SECISBP2LQ93073 1101 aaKnown RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 DNAJC7Q99615 494 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 C16orf70Q9BSU1 422 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 BDH2Q9BUT1 245 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 CHMP4BQ9H444 224 aaKnown RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 RNPEPQ9H4A4 650 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 MLXIPQ9HAP2 919 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 NGRNQ9NPE2 291 aaKnown RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 LUC7LQ9NQ29 371 aaKnown RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 PXMP2Q9NR77 195 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 PUF60Q9UHX1 559 aaKnown RBP7.02□□□□□ -1.29
CCDC6-203ENST00000518638 PLXNA4Q9HCM2 1894 aa7.02□□□□□ -1.29
CCDC6-203ENST00000518638 FRMPD2Q68DX3 1309 aaPredicted RBP7.01□□□□□ -1.29
CCDC6-203ENST00000518638 MYH6P13533 1939 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 M0QZ92 97 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 ORC4O43929 436 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 RANBP6O60518 1105 aaKnown RBP7.01□□□□□ -1.29
CCDC6-203ENST00000518638 STAM2O75886 525 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 LGALS2P05162 132 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 MPOP05164 745 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 GHRP10912 638 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 DNAJB1P25685 340 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 TECP42680 631 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 SRSF3P84103 164 aaKnown RBP7.01□□□□□ -1.29
CCDC6-203ENST00000518638 TRAF1Q13077 416 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 NEDD9Q14511 834 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 SPOUT1Q5T280 376 aaKnown RBP7.01□□□□□ -1.29
CCDC6-203ENST00000518638 LZTR1Q8N653 840 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 CYP2W1Q8TAV3 490 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 CHMP4CQ96CF2 233 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 TTC14Q96N46 770 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 MTA3Q9BTC8 594 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 S1PR5Q9H228 398 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 IL17RBQ9NRM6 502 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 ECHDC1Q9NTX5 307 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 TCP11L1Q9NUJ3 509 aa7.01□□□□□ -1.29
CCDC6-203ENST00000518638 SIRT5Q9NXA8 310 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms