RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 NOTCH4Q99466 2003 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 B3GNT5Q9BYG0 378 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 RHOBTB2Q9BYZ6 727 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 SNX25Q9H3E2 840 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 FAM124BQ9H5Z6 455 aaPredicted RBP10.54□□□□□ -0.72
CLN8-202ENST00000517514 MTMR10Q9NXD2 777 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 CEP72Q9P209 647 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 GTF3C4Q9UKN8 822 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 PCDHB4Q9Y5E5 795 aa10.54□□□□□ -0.72
CLN8-202ENST00000517514 ZNF638Q14966 1978 aaKnown RBP10.54□□□□□ -0.72
CLN8-202ENST00000517514 C5orf42Q9H799 3197 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 A0A1W2PQJ5 194 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 ARHGEF37A1IGU5 675 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 MTMR11A4FU01 709 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 A8MXQ7 604 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 CLDN5O00501 218 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 CYP26A1O43174 497 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 SEC24AO95486 1093 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 CCDC130P13994 396 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 NDUFV1P49821 464 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 CLCN4P51793 760 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 CACNA2D1P54289 1103 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 HYAL1Q12794 435 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 GPR17Q13304 367 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 RAPGEF1Q13905 1077 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 GSE1Q14687 1217 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 DUSP6Q16828 381 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 SLC39A12Q504Y0 691 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 TCEAL5Q5H9L2 206 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 MDH1BQ5I0G3 518 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 PDE12Q6L8Q7 609 aaKnown RBP10.53□□□□□ -0.72
CLN8-202ENST00000517514 PDXDC1Q6P996 788 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 PALB2Q86YC2 1186 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 FUKQ8N0W3 1084 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 ATAD1Q8NBU5 361 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 B3GALNT2Q8NCR0 500 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 MYCBPAPQ8TBZ2 947 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
CLN8-202ENST00000517514 MYLPFQ96A32 169 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 PCED1BQ96HM7 432 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 TMEM176AQ96HP8 235 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
CLN8-202ENST00000517514 CDX2Q99626 313 aaPredicted RBP10.53□□□□□ -0.72
CLN8-202ENST00000517514 NT5C1AQ9BXI3 368 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLN8-202ENST00000517514 LMCD1Q9NZU5 365 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 CAPN11Q9UMQ6 739 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 SPTBN5Q9NRC6 3674 aaKnown RBP10.53□□□□□ -0.72
CLN8-202ENST00000517514 C2orf16Q68DN1 1984 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 COL6A3P12111 3177 aa10.53□□□□□ -0.72
CLN8-202ENST00000517514 LRRC53A6NM62 1247 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 LINC01565O15544 149 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 TGM5O43548 720 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 CLSTN1O94985 981 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 GLP2RO95838 553 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 SPATA31D3P0C874 917 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 KRT5P13647 590 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 EPCAMP16422 314 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 TRIM21P19474 475 aaKnown RBP10.52□□□□□ -0.73
CLN8-202ENST00000517514 KCNA4P22459 653 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 RFX1P22670 979 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 BRD2P25440 801 aaKnown RBP10.52□□□□□ -0.73
CLN8-202ENST00000517514 PCSK1P29120 753 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 CASP14P31944 242 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 SOX5P35711 763 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 NRIP1P48552 1158 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 ARPP19P56211 112 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 COL19A1Q14993 1142 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
CLN8-202ENST00000517514 SPATA31D4Q6ZUB0 917 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 TMC6Q7Z403 805 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 IRF2BP2Q7Z5L9 587 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 RBM23Q86U06 439 aaKnown RBP10.52□□□□□ -0.73
CLN8-202ENST00000517514 SLC47A2Q86VL8 602 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 THEM5Q8N1Q8 247 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 TTC39CQ8N584 583 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 DEFB123Q8N688 67 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 ZNF461Q8TAF7 563 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 MICAL1Q8TDZ2 1067 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 CPLX3Q8WVH0 158 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 FAM81BQ96LP2 452 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 PGLYRP2Q96PD5 576 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 SYT11Q9BT88 431 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 EDEM3Q9BZQ6 932 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 ZNF518BQ9C0D4 1074 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 FAM49BQ9NUQ9 324 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 NOCTQ9UK39 431 aaKnown RBP10.52□□□□□ -0.73
CLN8-202ENST00000517514 FBXW11Q9UKB1 542 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 SSX2IPQ9Y2D8 614 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 DAAM1Q9Y4D1 1078 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 DENND4CQ5VZ89 1909 aa10.52□□□□□ -0.73
CLN8-202ENST00000517514 OBSL1O75147 1896 aa10.51□□□□□ -0.73
CLN8-202ENST00000517514 O00370 1275 aa10.51□□□□□ -0.73
CLN8-202ENST00000517514 GABBR2O75899 941 aa10.51□□□□□ -0.73
CLN8-202ENST00000517514 SOAT2O75908 522 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms