RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 MTHFD1LQ6UB35 978 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 LAYNQ6UX15 382 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 ZNF804AQ7Z570 1209 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 DTX2Q86UW9 622 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 B3GALNT2Q8NCR0 500 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 PLBD2Q8NHP8 589 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 IL31RAQ8NI17 732 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 ACTRT2Q8TDY3 377 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 IPCEF1Q8WWN9 437 aaPredicted RBP2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 LRTOMTQ8WZ04 291 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 FAM136AQ96C01 138 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 LRGUKQ96M69 825 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 TIMP4Q99727 224 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 PTDSS2Q9BVG9 487 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 C22orf23Q9BZE7 217 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 IKZF4Q9H2S9 585 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 DHX36Q9H2U1 1008 aaKnown RBP2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 SLAMF7Q9NQ25 335 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 XPNPEP3Q9NQH7 507 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 DDX21Q9NR30 783 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 ZSCAN32Q9NX65 697 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 OBP2AQ9NY56 170 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 EHD3Q9NZN3 535 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 XPR1Q9UBH6 696 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 ING1Q9UK53 422 aaPredicted RBP2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 TPCN1Q9ULQ1 816 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 TMX2Q9Y320 296 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 ENTPD2Q9Y5L3 495 aa2.68□□□□□ -1.98
RNU1-117P-201ENST00000517041 TRIM43BA6NCK2 446 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 ZAR1LA6NP61 321 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 VSTM5A8MXK1 200 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 F5H697 171 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 YY2O15391 372 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 TBC1D4O60343 1298 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 URI1O94763 535 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 TJP3O95049 919 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 UNC5CO95185 931 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 KIF20AO95235 890 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 PHKG2P15735 406 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RHCEP18577 417 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 FBLP22087 321 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 CXCR5P32302 372 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 SLC11A2P49281 568 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RARRES1P49788 294 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 TOB1P50616 345 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 CACNA2D1P54289 1103 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 ELLP55199 621 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RHDQ02161 417 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 COL10A1Q03692 680 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 FOXI1Q12951 378 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 LRRC41Q15345 812 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 SF3B3Q15393 1217 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RBM20Q5T481 1227 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 STRIP1Q5VSL9 837 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RNF220Q5VTB9 566 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 CYB5RLQ6IPT4 315 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 WDR53Q7Z5U6 358 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 VRK3Q8IV63 474 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RAVER1Q8IY67 606 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 SH2D3CQ8N5H7 860 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 FAM46DQ8NEK8 389 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 PPP1R35Q8TAP8 253 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 MYCBPAPQ8TBZ2 947 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 SMCR8Q8TEV9 937 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 TRIM43Q96BQ3 446 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 RSPRY1Q96DX4 576 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 APIPQ96GX9 242 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 ZNF668Q96K58 619 aaPredicted RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 AGAP2Q99490 1192 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 MESP1Q9BRJ9 268 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 DUSP26Q9BV47 211 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 NUP62CLQ9H1M0 184 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 ZMAT3Q9HA38 289 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 ATP6V0A4Q9HBG4 840 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 TRIM36Q9NQ86 728 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 A1CFQ9NQ94 594 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 SERHLQ9NQF3 203 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 AFF4Q9UHB7 1163 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 PCDHA6Q9UN73 950 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 G3BP2Q9UN86 482 aaKnown RBP2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 AGAP1Q9UPQ3 857 aa2.67□□□□□ -1.98
RNU1-117P-201ENST00000517041 BTN3A1O00481 513 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 SLC16A3O15427 465 aaKnown RBP2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 PRPF3O43395 683 aaKnown RBP2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 PPFIA2O75334 1257 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 MYF5P13349 255 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 PPP3CBP16298 524 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 HDCP19113 662 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 GATA3P23771 443 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 SLC7A1P30825 629 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 PDE6CP51160 858 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 MC2RQ01718 297 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 NHLH1Q02575 133 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 SLC13A2Q13183 592 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 SEMA5AQ13591 1074 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 BMPR2Q13873 1038 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 E2F2Q14209 437 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 CNGA2Q16280 664 aa2.66□□□□□ -1.98
RNU1-117P-201ENST00000517041 TXNRD1Q16881 649 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms