RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 FAM227BQ96M60 508 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZSWIM3Q96MP5 696 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 YTHDC1Q96MU7 727 aaKnown RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 TWNKQ96RR1 684 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 PRPF18Q99633 342 aaKnown RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 MESP1Q9BRJ9 268 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 NUDT22Q9BRQ3 303 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 MRI1Q9BV20 369 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 AGXT2Q9BYV1 514 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 PCDHAC1Q9H158 963 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 RNPEPQ9H4A4 650 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 LDAHQ9H6V9 325 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 L2HGDHQ9H9P8 463 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 NOD2Q9HC29 1040 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 SEPSECSQ9HD40 501 aaKnown RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 G6PC2Q9NQR9 355 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 SMC4Q9NTJ3 1288 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 GJB4Q9NTQ9 266 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZSCAN32Q9NX65 697 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 SIRT5Q9NXA8 310 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 ING3Q9NXR8 418 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 TMOD4Q9NZQ9 345 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 IFT80Q9P2H3 777 aaPredicted RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 XPR1Q9UBH6 696 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 DKK4Q9UBT3 224 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 HESX1Q9UBX0 185 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 MBD1Q9UIS9 605 aaPredicted RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 ADAM29Q9UKF5 820 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 CROTQ9UKG9 612 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZMYND8Q9ULU4 1186 aaPredicted RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 C19orf53Q9UNZ5 99 aaPredicted RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 SHOC2Q9UQ13 582 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 CLCA2Q9UQC9 943 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 RUVBL1Q9Y265 456 aaKnown RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 TMX2Q9Y320 296 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 AFG3L2Q9Y4W6 797 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 RBM8AQ9Y5S9 174 aaKnown RBP1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 HS3ST4Q9Y661 456 aa1.52□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZMYM3Q14202 1370 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TCRBV7S2A1N4TA0A589 114 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 DYTNA2CJ06 578 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 SH3D21A4FU49 640 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 A6NCN8 305 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 HMX3A6NHT5 357 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 SAC3D1A6NKF1 404 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZNF785A8K8V0 405 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 EFCAB8A8MWE9 144 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TMEM233B4DJY2 109 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 H0Y3Z8 333 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 M0QYG6 137 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 BIN1O00499 593 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 FCHO1O14526 889 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 KIAA0391O15091 583 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 DHHO43323 396 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 RRP9O43818 475 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ORC4O43929 436 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TSPAN3O60637 253 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TMCC2O75069 709 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ADAM23O75077 832 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZBED4O75132 1171 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 COQ9O75208 318 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 SASH1O94885 1247 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TBX18O95935 607 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 SCGB1D1O95968 90 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 POMCP01189 267 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 VIPP01282 170 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TFRCP02786 760 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 PRKCBP05771 671 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 POLBP06746 335 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ANXA6P08133 673 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 CNPP09543 421 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ATXN1LP0C7T5 689 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 PECAM1P16284 738 aaPredicted RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TPH1P17752 444 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 CHMP24386 653 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 CNTFP26441 200 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 MGAT1P26572 445 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 LRPAP1P30533 357 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 CSF2RBP32927 897 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZEB1P37275 1124 aaPredicted RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 CASRP41180 1078 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 AARSP49588 968 aaKnown RBP eCLIP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZNF135P52742 658 aaPredicted RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ATXN1P54253 815 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 PRKAA2P54646 552 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 NR1H2P55055 460 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 NPEPPSP55786 919 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 LOXL3P58215 753 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 CLRN1P58418 232 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 PSMC1P62191 440 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 SRSF3P84103 164 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 PIGFQ07326 219 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 UBXN2BQ14CS0 331 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 ANKRD1Q15327 319 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 SURF1Q15526 300 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 SMAD1Q15797 465 aaKnown RBP1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 KCNMB1Q16558 191 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 BAK1Q16611 211 aa1.51□□□□□ -2.17
RN7SKP88-201ENST00000516847 TIGD6Q17RP2 521 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms