RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ASGR1P07306 291 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 ATF7P17544 494 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 PTGIRP43119 386 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 GSCP56915 257 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 KCNA10Q16322 511 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 CCSAPQ6IQ19 270 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 TTC27Q6P3X3 843 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 DPH6Q7L8W6 267 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 SCN1AP35498 2009 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 GOLGA8SH3BPF8 625 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 DAPK3O43293 454 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 XPOTO43592 962 aaKnown RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 CHRNA1P02708 482 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 SSR1P43307 286 aaKnown RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 GABRB2P47870 512 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 PDCLQ13371 301 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 HLTFQ14527 1009 aaKnown RBP eCLIP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 LLGL1Q15334 1064 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 SESTD1Q86VW0 696 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 XYLT1Q86Y38 959 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 JAMLQ86YT9 394 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 NIPA2Q8N8Q9 360 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 C12orf50Q8NA57 414 aaPredicted RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 TSEN2Q8NCE0 465 aaKnown RBP16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 UBA3Q8TBC4 463 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 RAB17Q9H0T7 212 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 SYNCQ9H7C4 482 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 WDR35Q9P2L0 1181 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 ST3GAL5Q9UNP4 418 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 NME7Q9Y5B8 376 aa16.33■□□□□ 0.2
THUMPD3-210ENST00000515662 F8VP50 259 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 RPS6KA5O75582 802 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 KRT3P12035 628 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 SOX4Q06945 474 aaPredicted RBP16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 PIGHQ14442 188 aaPredicted RBP16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 ZNF268Q14587 947 aaPredicted RBP16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 SOWAHAQ2M3V2 549 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 DEFB115Q30KQ5 88 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 C12orf29Q8N999 325 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 ERP44Q9BS26 406 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 HERPUD2Q9BSE4 406 aa16.32■□□□□ 0.2
THUMPD3-210ENST00000515662 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 CTSHP09668 335 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 TCF4P15884 667 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 RFC1P35251 1148 aaPredicted RBP16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 COILP38432 576 aaPredicted RBP16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 MGAT3Q09327 533 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 DUPD1Q68J44 220 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 CCDC137Q6PK04 289 aaKnown RBP16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 MREGQ8N565 214 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 EXD1Q8NHP7 514 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 LRRC19Q9H756 370 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 FAM114A2Q9NRY5 505 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 TSPAN16Q9UKR8 245 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 GRIN2DO15399 1336 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 SPTLC1O15269 473 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 TOMM70O94826 608 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 PFKMP08237 780 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 CST5P28325 142 aaPredicted RBP16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 FNTAP49354 379 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 STILQ15468 1287 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 LRRC38Q5VT99 294 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 ACOT1Q86TX2 421 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 UNC93AQ86WB7 457 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 JOSD2Q8TAC2 188 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 MAIP1Q8WWC4 291 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 ZNF560Q96MR9 790 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 RUNDC3BQ96NL0 473 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 NEUROG2Q9H2A3 272 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 DPH5Q9H2P9 285 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 MED4Q9NPJ6 270 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 GDAP2Q9NXN4 497 aa16.31■□□□□ 0.2
THUMPD3-210ENST00000515662 KPNA7A9QM74 516 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 PTGESO14684 152 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 RPLP2P05387 115 aaKnown RBP16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 GJC1P36383 396 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 PNPLA4P41247 253 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 HNRNPH2P55795 449 aaKnown RBP16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 CCDC50Q8IVM0 306 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 MCRS1Q96EZ8 462 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 GOLGA2P5Q9HBQ8 144 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 RASAL2Q9UJF2 1139 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 GOLGA6BA6NDN3 693 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 AGPSO00116 658 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 RALAP11233 206 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 NFX1Q12986 1120 aaKnown RBP16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 HSP90B2PQ58FF3 399 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 PPP1R26Q5T8A7 1209 aaPredicted RBP16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 OR6B3Q8NGW1 331 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 TRIM31Q9BZY9 425 aa16.3■□□□□ 0.2
THUMPD3-210ENST00000515662 CENPFP49454 3210 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms