RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 TSC2P49815 1807 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 UPK3BL1B0FP48 263 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 BTBD18B2RXH4 712 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 UPK3BL2E5RIL1 263 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 TNFRSF10BO14763 440 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 MAP3K13O43283 966 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 ODC1P11926 461 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 DDX6P26196 483 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLDND1-231ENST00000515620 FOSBP53539 338 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 ECM1Q16610 540 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 ZNF423Q2M1K9 1284 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 CCDC33Q8N5R6 958 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 STKLD1Q8NE28 680 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 USP33Q8TEY7 942 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 HNRNPLLQ8WVV9 542 aaKnown RBP11.38□□□□□ -0.59
CLDND1-231ENST00000515620 WASF1Q92558 559 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 ATP2A3Q93084 1043 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 SPACA7Q96KW9 195 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 YTHDC1Q96MU7 727 aaKnown RBP11.38□□□□□ -0.59
CLDND1-231ENST00000515620 FNBP1Q96RU3 617 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 CCDC86Q9H6F5 360 aaKnown RBP11.38□□□□□ -0.59
CLDND1-231ENST00000515620 DUS2Q9NX74 493 aaKnown RBP11.38□□□□□ -0.59
CLDND1-231ENST00000515620 UBQLN1Q9UMX0 589 aaKnown RBP11.38□□□□□ -0.59
CLDND1-231ENST00000515620 LAMA5O15230 3695 aa11.38□□□□□ -0.59
CLDND1-231ENST00000515620 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 SLC16A4O15374 487 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 HIP1RO75146 1068 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 TOM1L1O75674 476 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 F11P03951 625 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 CCT6AP40227 531 aaKnown RBP11.37□□□□□ -0.59
CLDND1-231ENST00000515620 MATR3P43243 847 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLDND1-231ENST00000515620 IFNAR2P48551 515 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 PPP2R3AQ06190 1150 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 LYSMD4Q5XG99 296 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 HAUS3Q68CZ6 603 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 SLC23A3Q6PIS1 610 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 DIS3L2Q8IYB7 885 aaKnown RBP11.37□□□□□ -0.59
CLDND1-231ENST00000515620 DAW1Q8N136 415 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 FRMD1Q8N878 549 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 CCDC26Q8TAB7 109 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 OLIG1Q8TAK6 271 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 MDM1Q8TC05 714 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 OSCP1Q8WVF1 389 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 MRPS31Q92665 395 aaKnown RBP11.37□□□□□ -0.59
CLDND1-231ENST00000515620 LRIG1Q96JA1 1093 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 SENP8Q96LD8 212 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 ZCWPW1Q9H0M4 648 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 PDRG1Q9NUG6 133 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 ABI2Q9NYB9 513 aaPredicted RBP11.37□□□□□ -0.59
CLDND1-231ENST00000515620 MMP17Q9ULZ9 603 aa11.37□□□□□ -0.59
CLDND1-231ENST00000515620 MAGED2Q9UNF1 606 aaPredicted RBP11.37□□□□□ -0.59
CLDND1-231ENST00000515620 TTC26A0AVF1 554 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 CLDN3O15551 220 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 OPHN1O60890 802 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 ALDH1A2O94788 518 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 REC8O95072 547 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 OR52Z1P0C646 297 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 HAPLN1P10915 354 aaPredicted RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 HNRNPLP14866 589 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 HMGA1P17096 107 aaKnown RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 CYP3A5P20815 502 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 ITPKAP23677 461 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 P2RY2P41231 377 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 LILRA4P59901 499 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 GFPT1Q06210 699 aaPredicted RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 STRN3Q13033 797 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 USP4Q13107 963 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 ZNF268Q14587 947 aaPredicted RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 ZBTB6Q15916 424 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 ZNF77Q15935 545 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 CRY1Q16526 586 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 EML3Q32P44 896 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 TMEM92Q6UXU6 159 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 MON1AQ86VX9 555 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 EFCAB13Q8IY85 973 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 OR2I1PQ8NGU4 316 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 ADAM32Q8TC27 787 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 WHAMMQ8TF30 809 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 BCCIPQ9P287 314 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 PILRBQ9UKJ0 227 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 KIAA1024Q9UPX6 916 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 TNRC6BQ9UPQ9 1833 aaKnown RBP11.36□□□□□ -0.59
CLDND1-231ENST00000515620 MAST4O15021 2626 aa11.36□□□□□ -0.59
CLDND1-231ENST00000515620 PCNX2A6NKB5 2137 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 APC2O95996 2303 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 LACTBL1A8MY62 500 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 K7EQS6 105 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 XPOTO43592 962 aaKnown RBP11.35□□□□□ -0.59
CLDND1-231ENST00000515620 PFKFB2O60825 505 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 TADA3O75528 432 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 CKMP06732 381 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 CLTAP09496 248 aa11.35□□□□□ -0.59
CLDND1-231ENST00000515620 FDPSP14324 419 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms