RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 SUCLG2Q96I99 432 aa5.98□□□□□ -1.45
SMARCA5-203ENST00000515531 AGAP2Q99490 1192 aa5.98□□□□□ -1.45
SMARCA5-203ENST00000515531 SPATA5L1Q9BVQ7 753 aa5.98□□□□□ -1.45
SMARCA5-203ENST00000515531 TRIM54Q9BYV2 358 aa5.98□□□□□ -1.45
SMARCA5-203ENST00000515531 ATP6V0A4Q9HBG4 840 aa5.98□□□□□ -1.45
SMARCA5-203ENST00000515531 CHRM2P08172 466 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 XRCC6P12956 609 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 ADRA1BP35368 520 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 PLA2G5P39877 138 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 SLC11A2P49281 568 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 LOXL3P58215 753 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 SLC13A2Q13183 592 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 RAB32Q13637 225 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 KIAA0753Q2KHM9 967 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 NBPF8Q3BBV2 869 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 PCSK4Q6UW60 755 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 CHST15Q7LFX5 561 aaPredicted RBP5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 DNAJC5GQ8N7S2 189 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 CAGE1Q8TC20 777 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 ACTRT2Q8TDY3 377 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 FAM136AQ96C01 138 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 ACTRT3Q9BYD9 372 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 C22orf23Q9BZE7 217 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 AMBRA1Q9C0C7 1298 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 SLITRK6Q9H5Y7 841 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 ZSCAN32Q9NX65 697 aa5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.97□□□□□ -1.45
SMARCA5-203ENST00000515531 CCDC151A5D8V7 595 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 A6NNZ2 444 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 GOLIM4O00461 696 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 TPP1O14773 563 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 MGEA5O60502 916 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 ZBED1O96006 694 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 CYP2C9P11712 490 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 BRAFP15056 766 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 VIPR2P41587 438 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 HNRNPMP52272 730 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 ARFIP2P53365 341 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 LILRA4P59901 499 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 FAM193AP78312 1265 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 CTBP1Q13363 440 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 PTPRRQ15256 657 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 ICE2Q659A1 982 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 SWSAP1Q6NVH7 229 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 APOA5Q6Q788 366 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 LRTOMTQ8WZ04 291 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 TFAP2BQ92481 460 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 ANKS1AQ92625 1134 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 CCDC136Q96JN2 1154 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 LRRC27Q9C0I9 530 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 ZNHIT2Q9UHR6 403 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 SHOC2Q9UQ13 582 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 USP19O94966 1318 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 SALL3Q9BXA9 1300 aa5.96□□□□□ -1.46
SMARCA5-203ENST00000515531 ISM1B1AKI9 464 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 DCLK1O15075 740 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 SUV39H1O43463 412 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 LMNAP02545 664 aaKnown RBP5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 EN2P19622 333 aaPredicted RBP5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 BMP5P22003 454 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 ZNF134P52741 427 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 SUMO3P55854 103 aaPredicted RBP5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 ZNF169Q14929 603 aaPredicted RBP5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 KIAA0895LQ68EN5 471 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 ZG16BQ96DA0 208 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 PTDSS2Q9BVG9 487 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 RIOX1Q9H6W3 641 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 KIAA1586Q9HCI6 787 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 KLC4Q9NSK0 619 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 SACM1LQ9NTJ5 587 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 C11orf21Q9P2W6 132 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 PAXBP1Q9Y5B6 917 aa5.95□□□□□ -1.46
SMARCA5-203ENST00000515531 MYO1FO00160 1098 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 TBX3O15119 743 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 FRS3O43559 492 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 MAP4K4O95819 1239 aaPredicted RBP5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 HRGP04196 525 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 MYF5P13349 255 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 ZKSCAN1P17029 563 aaPredicted RBP5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 LRPAP1P30533 357 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 WNT3P56703 355 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 KRT17Q04695 432 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 E2F2Q14209 437 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 POLD3Q15054 466 aaPredicted RBP5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 CNGA2Q16280 664 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 VPS53Q5VIR6 699 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 DGKHQ86XP1 1220 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 TTC17Q96AE7 1141 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 ALG8Q9BVK2 526 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 DPH1Q9BZG8 443 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 ZNF518BQ9C0D4 1074 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 CPNE7Q9UBL6 633 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 TLK1Q9UKI8 766 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 OGDHLQ9ULD0 1010 aa5.94□□□□□ -1.46
SMARCA5-203ENST00000515531 A0A087WWL8 130 aa5.93□□□□□ -1.46
SMARCA5-203ENST00000515531 ZAR1LA6NP61 321 aa5.93□□□□□ -1.46
SMARCA5-203ENST00000515531 KIAA0355O15063 1070 aa5.93□□□□□ -1.46
SMARCA5-203ENST00000515531 NUDT3O95989 172 aa5.93□□□□□ -1.46
SMARCA5-203ENST00000515531 TYRP1P17643 537 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms