RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	MYO1E	Q12965	1108 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	SURF1	Q15526	300 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	CFAP221	Q4G0U5	840 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	FAM26F	Q5R3K3	315 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	RALGPS2	Q86X27	583 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	CSGALNACT2	Q8N6G5	542 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	IQUB	Q8NA54	791 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	GLIS3	Q8NEA6	775 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	GIPC2	Q8TF65	315 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	NOC3L	Q8WTT2	800 aa	Known RBP	13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	DHX58	Q96C10	678 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	PKMYT1	Q99640	499 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	PCIF1	Q9H4Z3	704 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	KIF9	Q9HAQ2	790 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	KIAA1586	Q9HCI6	787 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	TMLHE	Q9NVH6	421 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	INTS13	Q9NVM9	706 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	HSPBP1	Q9NZL4	362 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	UXT	Q9UBK9	157 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	SMG5	Q9UPR3	1016 aa	Known RBP	13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	SNX9	Q9Y5X1	595 aa		13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	EP300	Q09472	2414 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK18-223	ENST00000515514	PTPRJ	Q12913	1337 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	ZNF233	A6NK53	670 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	SOBP	A7XYQ1	873 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	SPECC1L-ADORA2A	F8WAN1	911 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	GABRD	O14764	452 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	PRPF40A	O75400	957 aa	Known RBP	13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	TNNC2	P02585	160 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	ID4	P47928	161 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	LHX1	P48742	406 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	NRL	P54845	237 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	NLRP12	P59046	1061 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	RPL10A	P62906	217 aa	Known RBP	13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	SHC4	Q6S5L8	630 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	DPH6	Q7L8W6	267 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	ERMP1	Q7Z2K6	904 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	TMEM150A	Q86TG1	271 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	CBWD2	Q8IUF1	395 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	WDR49	Q8IV35	697 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	HSCB	Q8IWL3	235 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	CMTM8	Q8IZV2	173 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	CELF5	Q8N6W0	485 aa	Known RBP	13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	TRMT2B	Q96GJ1	504 aa	Known RBP	13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	FAM84A	Q96KN4	292 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	LRRC3B	Q96PB8	259 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	PI4K2A	Q9BTU6	479 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	LMAN1L	Q9HAT1	526 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	THG1L	Q9NWX6	298 aa	Known RBP	13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	OBSL1	O75147	1896 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	FRYL	O94915	3013 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	DCHS1	Q96JQ0	3298 aa		13.24	□□□□□ -0.29
CDK18-223	ENST00000515514	GPR179	Q6PRD1	2367 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	DMXL1	Q9Y485	3027 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	NOL4	O94818	638 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	PAPSS2	O95340	614 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	F11	P03951	625 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	ZSCAN22	P10073	491 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	ACAT1	P24752	427 aa	Known RBP	13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	HOXD13	P35453	343 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	AVPR1A	P37288	418 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	SOX9	P48436	509 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	CDR1	P51861	262 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	SNRPF	P62306	86 aa	Known RBP	13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	EHHADH	Q08426	723 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	DUOXA2	Q1HG44	320 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	DGKK	Q5KSL6	1271 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	TSSK4	Q6SA08	328 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	UNC13D	Q70J99	1090 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	LIMS2	Q7Z4I7	341 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	SPEM1	Q8N4L4	309 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	OR5B17	Q8NGF7	314 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	MRPS31	Q92665	395 aa	Known RBP	13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	HPS3	Q969F9	1004 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	ZFYVE19	Q96K21	471 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	C7orf25	Q9BPX7	421 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	SLC46A2	Q9BY10	475 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	AGPAT3	Q9NRZ7	376 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	GTSE1	Q9NYZ3	720 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	NCDN	Q9UBB6	729 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	TFIP11	Q9UBB9	837 aa	Known RBP	13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	CACNA1A	O00555	2505 aa		13.23	□□□□□ -0.29
CDK18-223	ENST00000515514	TULP1	O00294	542 aa	Predicted RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	TADA3	O75528	432 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	F13A1	P00488	732 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	HSP90AA1	P07900	732 aa	Known RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	MAGEA11	P43364	429 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	GPR15	P49685	360 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	GAS6	Q14393	721 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	ZNF268	Q14587	947 aa	Predicted RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	MAPRE1	Q15691	268 aa	Known RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	SNRNP35	Q16560	246 aa	Known RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	SOWAHA	Q2M3V2	549 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	ITPRIPL2	Q3MIP1	535 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	ATL3	Q6DD88	541 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	TXNDC11	Q6PKC3	985 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms