RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 TJP2Q9UDY2 1190 aa18.37■□□□□ 0.53
PRDM5-212ENST00000515109 SLC12A4Q9UP95 1085 aa18.37■□□□□ 0.53
PRDM5-212ENST00000515109 AGTPBP1Q9UPW5 1226 aa18.37■□□□□ 0.53
PRDM5-212ENST00000515109 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
PRDM5-212ENST00000515109 B4GALT4O60513 344 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 IFNB1P01574 187 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 ITGAVP06756 1048 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 RFC1P35251 1148 aaPredicted RBP18.36■□□□□ 0.53
PRDM5-212ENST00000515109 GTF2A1P52655 376 aaPredicted RBP18.36■□□□□ 0.53
PRDM5-212ENST00000515109 TFDP1Q14186 410 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 FASTKD3Q14CZ7 662 aaKnown RBP18.36■□□□□ 0.53
PRDM5-212ENST00000515109 ZKSCAN8Q15776 578 aaPredicted RBP18.36■□□□□ 0.53
PRDM5-212ENST00000515109 TMEM63BQ5T3F8 832 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 PLPPR4Q7Z2D5 763 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 SGSM3Q96HU1 749 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 TGS1Q96RS0 853 aaKnown RBP18.36■□□□□ 0.53
PRDM5-212ENST00000515109 ZWILCHQ9H900 591 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 PTPRHQ9HD43 1115 aa18.36■□□□□ 0.53
PRDM5-212ENST00000515109 SOCS7O14512 581 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 SUN1O94901 812 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 CXCL8P10145 99 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 KRT3P12035 628 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 DYNLT1P63172 113 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 SMTNL2Q2TAL5 461 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 WDR72Q3MJ13 1102 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 FAM133BQ5BKY9 247 aaKnown RBP18.35■□□□□ 0.53
PRDM5-212ENST00000515109 RNASEH2BQ5TBB1 312 aaKnown RBP18.35■□□□□ 0.53
PRDM5-212ENST00000515109 POLNQ7Z5Q5 900 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 JOSD2Q8TAC2 188 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 MAML1Q92585 1016 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 SPATA33Q96N06 139 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 PCDH9Q9HC56 1237 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 CYTH4Q9UIA0 394 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 C3orf70A6NLC5 250 aaPredicted RBP18.35■□□□□ 0.53
PRDM5-212ENST00000515109 POC1B-GALNT4F8VUJ3 575 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 MED7O43513 233 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 GCAP28676 217 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 PSMC1P62191 440 aaKnown RBP18.35■□□□□ 0.53
PRDM5-212ENST00000515109 SLC25A11Q02978 314 aaKnown RBP18.35■□□□□ 0.53
PRDM5-212ENST00000515109 ZNF667Q5HYK9 610 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 PPP1R21Q6ZMI0 780 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 TMEM192Q8IY95 271 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 GPC2Q8N158 579 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 ZBTB10Q96DT7 871 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 MAGEB18Q96M61 343 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 CDT1Q9H211 546 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 FZD8Q9H461 694 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 VPS37BQ9H9H4 285 aa18.35■□□□□ 0.53
PRDM5-212ENST00000515109 RPF1Q9H9Y2 349 aaKnown RBP18.35■□□□□ 0.53
PRDM5-212ENST00000515109 SIGLEC16A6NMB1 481 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 CNMDO75829 334 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 PSMC4P43686 418 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 CLCN3P51790 818 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 CAPN12Q6ZSI9 719 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 SPATA21Q7Z572 469 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 PARP9Q8IXQ6 854 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 DHX37Q8IY37 1157 aaKnown RBP18.34■□□□□ 0.53
PRDM5-212ENST00000515109 SLC35B2Q8TB61 432 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 FGD4Q96M96 766 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 ASCC2Q9H1I8 757 aaPredicted RBP18.34■□□□□ 0.53
PRDM5-212ENST00000515109 LHX5Q9H2C1 402 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 SHOC2Q9UQ13 582 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 NDC80O14777 642 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 LRCH4O75427 683 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 CDH8P55286 799 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
PRDM5-212ENST00000515109 ORC1Q13415 861 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 EFCAB12Q6NXP0 572 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 CENPUQ71F23 418 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 FBXO16Q8IX29 292 aaPredicted RBP18.34■□□□□ 0.53
PRDM5-212ENST00000515109 ZBED8Q8IZ13 594 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 OTUD5Q96G74 571 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 SYNCQ9H7C4 482 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 ELP3Q9H9T3 547 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 SAE1Q9UBE0 346 aaPredicted RBP18.34■□□□□ 0.53
PRDM5-212ENST00000515109 GGT7Q9UJ14 662 aa18.34■□□□□ 0.53
PRDM5-212ENST00000515109 FAM47DPA6NHR8 397 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 IRF6O14896 467 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 UBOX5O94941 541 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 IL18RAPO95256 599 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 KRT7P08729 469 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 IL1R2P27930 398 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 RAD23BP54727 409 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 OTUD4Q01804 1114 aaKnown RBP18.33■□□□□ 0.53
PRDM5-212ENST00000515109 MBTD1Q05BQ5 628 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 NR1H3Q13133 447 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 HADHQ16836 314 aaKnown RBP18.33■□□□□ 0.53
PRDM5-212ENST00000515109 KCNT1Q5JUK3 1230 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 TRABD2AQ86V40 505 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 TMEM130Q8N3G9 435 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 ARFGAP1Q8N6T3 406 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 ACTL9Q8TC94 416 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 PRCCQ92733 491 aaPredicted RBP18.33■□□□□ 0.53
PRDM5-212ENST00000515109 COPS5Q92905 334 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 BCO2Q9BYV7 579 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 MINDY3Q9H8M7 445 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 METTL5Q9NRN9 209 aaKnown RBP18.33■□□□□ 0.53
PRDM5-212ENST00000515109 SIX4Q9UIU6 781 aa18.33■□□□□ 0.53
PRDM5-212ENST00000515109 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
PRDM5-212ENST00000515109 SPAG7O75391 227 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms