RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 SMARCA1P28370 1054 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 ERVK-21P61565 698 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 KLF1Q13351 362 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-211ENST00000514893 ICE2Q659A1 982 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 NAPRTQ6XQN6 538 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 PARS2Q7L3T8 475 aaKnown RBP5.04□□□□□ -1.6
NEDD4-211ENST00000514893 SPATS2Q86XZ4 545 aaKnown RBP5.04□□□□□ -1.6
NEDD4-211ENST00000514893 SMRP1Q8NCR6 262 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 MARK4Q96L34 752 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 VPS33BQ9H267 617 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 GPR35Q9HC97 309 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 DUSP22Q9NRW4 184 aa5.04□□□□□ -1.6
NEDD4-211ENST00000514893 TRNAU1APQ9NX07 287 aaKnown RBP5.04□□□□□ -1.6
NEDD4-211ENST00000514893 F2RL2O00254 374 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 PDE1AP54750 535 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 IL10RAQ13651 578 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 Q4G0T1 1027 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 TREML2Q5T2D2 321 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 VPS53Q5VIR6 699 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 RNF219Q5W0B1 726 aaPredicted RBP5.03□□□□□ -1.6
NEDD4-211ENST00000514893 TRIM72Q6ZMU5 477 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 IRF2BP2Q7Z5L9 587 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 C16orf52Q8NHV5 167 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 DMRTA2Q96SC8 542 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 ZNF112Q9UJU3 913 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 IPPQ9Y573 584 aa5.03□□□□□ -1.6
NEDD4-211ENST00000514893 FAM90A10PA6NDY2 464 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 E5RJQ4 531 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 POC1B-GALNT4F8VUJ3 575 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 VPS4BO75351 444 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 PDHA1P08559 390 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 NPSP0C0P6 89 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 MALP21145 153 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 IL1R2P27930 398 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 GCLCP48506 637 aaPredicted RBP5.02□□□□□ -1.61
NEDD4-211ENST00000514893 ZNF135P52742 658 aaPredicted RBP5.02□□□□□ -1.61
NEDD4-211ENST00000514893 LINC00205P59089 165 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 CYP4F2P78329 520 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 TCF15Q12870 199 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 CERKLQ49MI3 558 aaPredicted RBP5.02□□□□□ -1.61
NEDD4-211ENST00000514893 TTC7BQ86TV6 843 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 GALNT4Q8N4A0 578 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 RP9Q8TA86 221 aaKnown RBP5.02□□□□□ -1.61
NEDD4-211ENST00000514893 CYP2W1Q8TAV3 490 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 DDX17Q92841 729 aaKnown RBP5.02□□□□□ -1.61
NEDD4-211ENST00000514893 DAZAP1Q96EP5 407 aaKnown RBP5.02□□□□□ -1.61
NEDD4-211ENST00000514893 FAM118BQ9BPY3 351 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 SERHLQ9NQF3 203 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 PDGFCQ9NRA1 345 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 ADAMTS5Q9UNA0 930 aa5.02□□□□□ -1.61
NEDD4-211ENST00000514893 H7C1Q1 480 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
NEDD4-211ENST00000514893 IL6RP08887 468 aaPredicted RBP5.01□□□□□ -1.61
NEDD4-211ENST00000514893 ENGP17813 658 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 CHRM3P20309 590 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 LIPAP38571 399 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 SNAPC2Q13487 334 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 KHDC1Q4VXA5 237 aaKnown RBP5.01□□□□□ -1.61
NEDD4-211ENST00000514893 PGM2L1Q6PCE3 622 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 SHC4Q6S5L8 630 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 MEPCEQ7L2J0 689 aaKnown RBP5.01□□□□□ -1.61
NEDD4-211ENST00000514893 LRRC71Q8N4P6 559 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 NRACQ8N912 160 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 VCPIP1Q96JH7 1222 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 VRK1Q99986 396 aaPredicted RBP5.01□□□□□ -1.61
NEDD4-211ENST00000514893 LIMCH1Q9UPQ0 1083 aa5.01□□□□□ -1.61
NEDD4-211ENST00000514893 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 UBE2Q2LH0YL09 131 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 OAZ2O95190 189 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 CHRM5P08912 532 aaPredicted RBP5□□□□□ -1.61
NEDD4-211ENST00000514893 RARBP10826 455 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 ATP5F1P24539 256 aaPredicted RBP5□□□□□ -1.61
NEDD4-211ENST00000514893 KCNJ5P48544 419 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 ACAP2Q15057 778 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 MTHFD1LQ6UB35 978 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 LHFPL2Q6ZUX7 228 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 MAVSQ7Z434 540 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 USP37Q86T82 979 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 JADE3Q92613 823 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 CUL5Q93034 780 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 COQ8BQ96D53 544 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 RITA1Q96K30 269 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 FSD1LQ9BXM9 530 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 MKS1Q9NXB0 559 aa5□□□□□ -1.61
NEDD4-211ENST00000514893 CCNL1Q9UK58 526 aaPredicted RBP5□□□□□ -1.61
NEDD4-211ENST00000514893 CFAP20Q9Y6A4 193 aaKnown RBP5□□□□□ -1.61
NEDD4-211ENST00000514893 CCDC154A6NI56 674 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 DSCR3O14972 297 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 KIF20AO95235 890 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 FTH1P19P0C7X4 201 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 C3orf36Q3SXR2 165 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 SLC4A10Q6U841 1118 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 TMEM108Q6UXF1 575 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 ABHD11Q8NFV4 315 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 NSUN6Q8TEA1 469 aaKnown RBP4.99□□□□□ -1.61
NEDD4-211ENST00000514893 LYZL4Q96KX0 146 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 TUBD1Q9UJT1 453 aa4.99□□□□□ -1.61
NEDD4-211ENST00000514893 SCAF8Q9UPN6 1271 aaKnown RBP4.99□□□□□ -1.61
NEDD4-211ENST00000514893 KLHL33A6NCF5 533 aa4.98□□□□□ -1.61
NEDD4-211ENST00000514893 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms