RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 WNT16Q9UBV4 365 aa20.26■□□□□ 0.83
LPCAT1-206ENST00000514484 TRAF3IP3Q9Y228 551 aa20.26■□□□□ 0.83
LPCAT1-206ENST00000514484 ASB3Q9Y575 518 aa20.26■□□□□ 0.83
LPCAT1-206ENST00000514484 NME7Q9Y5B8 376 aa20.26■□□□□ 0.83
LPCAT1-206ENST00000514484 CACNA1HO95180 2353 aa20.26■□□□□ 0.83
LPCAT1-206ENST00000514484 COL4A2P08572 1712 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 STK25O00506 426 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 ECI2O75521 394 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 MICAL2O94851 1124 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 KIF20AO95235 890 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 PDGFRBP09619 1106 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 CYP2F1P24903 491 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 VIPR2P41587 438 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 TNNC1P63316 161 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 CYP4F8P98187 520 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 SMARCB1Q12824 385 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 NFE2Q16621 373 aaPredicted RBP20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 WDR72Q3MJ13 1102 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 GUF1Q8N442 669 aaKnown RBP20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 ZSCAN18Q8TBC5 510 aaPredicted RBP20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 SPATA18Q8TC71 538 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 FAM122AQ96E09 287 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 XYLT2Q9H1B5 865 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 TBC1D17Q9HA65 648 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 FRMD4BQ9Y2L6 1034 aa20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 ARIH1Q9Y4X5 557 aaPredicted RBP20.25■□□□□ 0.83
LPCAT1-206ENST00000514484 KIF26AQ9ULI4 1882 aaPredicted RBP20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 PI15O43692 258 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 VNN1O95497 513 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 RFX1P22670 979 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 WARSP23381 471 aaKnown RBP20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 TAF12Q16514 161 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 DDR2Q16832 855 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 ZNF699Q32M78 642 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 SCARA5Q6ZMJ2 495 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 DPH6Q7L8W6 267 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 SPATA2LQ8IUW3 424 aaPredicted RBP20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 TMEM174Q8WUU8 243 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 SMARCD2Q92925 531 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 MYLPFQ96A32 169 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 ELSPBP1Q96BH3 223 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 EEF2KMTQ96G04 330 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 ATXN3LQ9H3M9 355 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 SMYD3Q9H7B4 428 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 ZFP14Q9HCL3 533 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 CRTAC1Q9NQ79 661 aa20.24■□□□□ 0.83
LPCAT1-206ENST00000514484 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 AKAP3O75969 853 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 C4BPAP04003 597 aaKnown RBP20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 TRIM49P0CI25 452 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 TRIM49CP0CI26 452 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 RAP1GAPP47736 663 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 CLDN10P78369 228 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 NCOA4Q13772 614 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 ZCWPW2Q504Y3 356 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 C1orf220Q5T0J3 134 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 VITQ6UXI7 678 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 OR6B3Q8NGW1 331 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 MKNK1Q9BUB5 465 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 SNX25Q9H3E2 840 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 DPEP3Q9H4B8 488 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 IL21Q9HBE4 155 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.23■□□□□ 0.833e-10■■■■■ 153.8
LPCAT1-206ENST00000514484 CDH9Q9ULB4 789 aa20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
LPCAT1-206ENST00000514484 AOC1P19801 751 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 PRCPP42785 496 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 CLCN5P51795 746 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 TCF15Q12870 199 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 MDH1BQ5I0G3 518 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 GPR158Q5T848 1215 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 SCN4BQ8IWT1 228 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 TMC2Q8TDI7 906 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 SYAP1Q96A49 352 aaPredicted RBP20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 RSPRY1Q96DX4 576 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 FOXQ1Q9C009 403 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 ABCB6Q9NP58 842 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 CIZ1Q9ULV3 898 aaPredicted RBP20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 PCDHA5Q9Y5H7 936 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 F5P12259 2224 aa20.22■□□□□ 0.83
LPCAT1-206ENST00000514484 STAU1O95793 577 aaKnown RBP20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 HMGA1P17096 107 aaKnown RBP20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 ATICP31939 592 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 GNL1P36915 607 aaPredicted RBP20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 PIK3CAP42336 1068 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 VAMP7P51809 220 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 AP3M2P53677 418 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 CYP27A1Q02318 531 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 NHLH1Q02575 133 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 MLF2Q15773 248 aaPredicted RBP20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 NFIL3Q16649 462 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 ZACNQ401N2 412 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 FAM171BQ6P995 826 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 FAM186BQ8IYM0 893 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 GCNAQ96QF7 691 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 MMRN2Q9H8L6 949 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 RMND1Q9NWS8 449 aa20.21■□□□□ 0.83
LPCAT1-206ENST00000514484 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms