RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	GPSM2	P81274	684 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	MRPS21	P82921	87 aa	Known RBP	5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	SATB1	Q01826	763 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	ZNF267	Q14586	743 aa	Predicted RBP	5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	IQCB1	Q15051	598 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	FAM153C	Q494X1	144 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	ZNF618	Q5T7W0	954 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	LAYN	Q6UX15	382 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	DAAM2	Q86T65	1068 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	DTX2	Q86UW9	622 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	ARHGEF25	Q86VW2	580 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	RFK	Q969G6	155 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	SLC46A1	Q96NT5	459 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	TAAR9	Q96RI9	348 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	SH2B3	Q9UQQ2	575 aa		5.28	□□□□□ -1.56
MATR3-223	ENST00000514402	LINC00473	A8K010	186 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	UNC5C	O95185	931 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	ONECUT2	O95948	504 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	XRCC6	P12956	609 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	ZFX	P17010	805 aa	Predicted RBP	5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	CHRM3	P20309	590 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	HTR1B	P28222	390 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	AGFG1	P52594	562 aa	Known RBP	5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	PLEKHG6	Q3KR16	790 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	TMEM108	Q6UXF1	575 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	PTF1A	Q7RTS3	328 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	ZNF551	Q7Z340	670 aa	Predicted RBP	5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	PLBD2	Q8NHP8	589 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	KBTBD7	Q8WVZ9	684 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	MRGPRX1	Q96LB2	322 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	PTDSS2	Q9BVG9	487 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	ADARB2	Q9NS39	739 aa	Known RBP	5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	SERTAD4	Q9NUC0	356 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	PCDHA6	Q9UN73	950 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	SHOC2	Q9UQ13	582 aa		5.27	□□□□□ -1.57
MATR3-223	ENST00000514402	VWC2L	B2RUY7	222 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	GRP	P07492	148 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	ITPKB	P27987	946 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	LRPAP1	P30533	357 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	PXN	P49023	591 aa	Predicted RBP	5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	BOP1	Q14137	746 aa	Known RBP	5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	ANO6	Q4KMQ2	910 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	COLEC12	Q5KU26	742 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	NXN	Q6DKJ4	435 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	TPH2	Q8IWU9	490 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	FBXO41	Q8TF61	875 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	ZNF384	Q8TF68	577 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	HAPLN3	Q96S86	360 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	ACO2	Q99798	780 aa	Known RBP	5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	ASB6	Q9NWX5	421 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	WNT6	Q9Y6F9	365 aa		5.26	□□□□□ -1.57
MATR3-223	ENST00000514402	DCLK1	O15075	740 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	ERC2	O15083	957 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	SLC16A3	O15427	465 aa	Known RBP	5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	PHGDH	O43175	533 aa	Known RBP	5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	MARCH6	O60337	910 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	TUSC2	O75896	110 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	S100B	P04271	92 aa	Predicted RBP	5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	RHO	P08100	348 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	ELFN1	P0C7U0	828 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	NR2F6	P10588	404 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	ZNF134	P52741	427 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	ARFIP2	P53365	341 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	TBCC	Q15814	346 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	NFE2	Q16621	373 aa	Predicted RBP	5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	MINDY4	Q4G0A6	757 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	TSTD2	Q5T7W7	516 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	FAM102B	Q5T8I3	360 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	VPS53	Q5VIR6	699 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	ANKRD16	Q6P6B7	361 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	TRIM54	Q9BYV2	358 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	DPH1	Q9BZG8	443 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	TTYH3	Q9C0H2	523 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	ARMT1	Q9H993	441 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	CPNE5	Q9HCH3	593 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	XPR1	Q9UBH6	696 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	THRAP3	Q9Y2W1	955 aa	Known RBP	5.25	□□□□□ -1.57
MATR3-223	ENST00000514402	TMX2	Q9Y320	296 aa		5.25	□□□□□ -1.57
MATR3-223	ENST00000514402		A0A1W2PPL8	197 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	FAM227A	F5H4B4	570 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	MYO1C	O00159	1063 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	RBMXL2	O75526	392 aa	Known RBP	5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	ALDH9A1	P49189	494 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	CCT8	P50990	548 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	E2F2	Q14209	437 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	ZNF783	Q6ZMS7	281 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	ZNF804A	Q7Z570	1209 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	TCEAL8	Q8IYN2	117 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	PCSK9	Q8NBP7	692 aa	Known RBP	5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	TBC1D5	Q92609	795 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	RUNDC1	Q96C34	613 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	TMEM60	Q9H2L4	133 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	ANLN	Q9NQW6	1124 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	ARHGEF3	Q9NR81	526 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	IL17RB	Q9NRM6	502 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402	C1orf112	Q9NSG2	853 aa		5.24	□□□□□ -1.57
MATR3-223	ENST00000514402		A0A087WWL8	130 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms