RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 WDR72Q3MJ13 1102 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 IRGCQ6NXR0 463 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 SV2BQ7L1I2 683 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TICAM1Q8IUC6 712 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 KIRREL3Q8IZU9 778 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 IL31RAQ8NI17 732 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 KRT35Q92764 455 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 GRAMD1AQ96CP6 724 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PSMB7Q99436 277 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 BCAS3Q9H6U6 928 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PLAC1Q9HBJ0 212 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 STARD7Q9NQZ5 370 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 SAR1AQ9NR31 198 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 NRCAMQ92823 1304 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TLDC2A0PJX2 215 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 KCNK3O14649 394 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 DYNC1LI2O43237 492 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PEX10O60683 326 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 EDF1O60869 148 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 RGS20O76081 388 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 FGFR1OPO95684 399 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 VDRP11473 427 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 EZRP15311 586 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 ATP2A2P16615 1042 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 RFX1P22670 979 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 SOX5P35711 763 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 CHKAP35790 457 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 GRIA2P42262 883 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PSEN2P49810 448 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 EMP3P54852 163 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 BFSP2Q13515 415 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 GNASQ5JWF2 1037 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 CAPRIN2Q6IMN6 1127 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TAF2Q6P1X5 1199 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 ALKBH5Q6P6C2 394 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 C4orf50Q6ZRC1 276 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 OTUD6AQ7L8S5 288 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 RSPH3Q86UC2 560 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 HOOK3Q86VS8 718 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 SYCE1Q8N0S2 351 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PCDHB18PQ96TA0 734 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 NT5C3AQ9H0P0 336 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 MUC3BQ9H195 1237 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 DENND2DQ9H6A0 471 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TMEM260Q9NX78 707 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 KCND2Q9NZV8 630 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 ARHGAP28Q9P2N2 729 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 COQ4Q9Y3A0 265 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 A0A0B4J269 797 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 A0A1W2PPC1 479 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 A0A1W2PQ45 241 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 A0A1W2PQY0 241 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PODXLO00592 558 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 MSH4O15457 936 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 CCNT1O60563 726 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 EFCAB14O75071 495 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 P4HBP07237 508 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 RFC5P40937 340 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TECP42680 631 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 MTIF2P46199 727 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 CSRP3P50461 194 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 CDK7P50613 346 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 DR1Q01658 176 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 KCNC4Q03721 635 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TBL3Q12788 808 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TUBB3Q13509 450 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PPP2R5AQ15172 486 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 LETM2Q2VYF4 491 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PHLDB3Q6NSJ2 640 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 AADACL2Q6P093 401 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 ABHD15Q6UXT9 468 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 MIER3Q7Z3K6 550 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 DNAAF5Q86Y56 855 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 C4orf19Q8IY42 314 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 IFT81Q8WYA0 676 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PDZD7Q9H5P4 517 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 UBN1Q9NPG3 1134 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 LMCD1Q9NZU5 365 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 E7ESA3 106 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 C2CD2LO14523 706 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 GSRP00390 522 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 COILP38432 576 aaPredicted RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 PSMC5P62195 406 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 MRPS35P82673 323 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 PTK7Q13308 1070 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 LSAMPQ13449 338 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 KRT72Q14CN4 511 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 PDK4Q16654 411 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 PRR16Q569H4 304 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SDE2Q6IQ49 451 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SLC39A5Q6ZMH5 540 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 TRABD2AQ86V40 505 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 PLEKHO2Q8TD55 490 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 GLG1Q92896 1179 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 CDC42EP4Q9H3Q1 356 aaKnown RBP7.82□□□□□ -1.16
CLIP1-205ENST00000514271 ST6GALNAC4Q9H4F1 302 aa7.82□□□□□ -1.16
CLIP1-205ENST00000514271 SFMBT1Q9UHJ3 866 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms