RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CCDC83Q8IWF9 413 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 FBXO18Q8NFZ0 1043 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 GATA6Q92908 595 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 PNMA5Q96PV4 448 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 PYM1Q9BRP8 204 aaKnown RBP21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 ECT2Q9H8V3 914 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 TMEM9BQ9NQ34 198 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 KCNG1Q9UIX4 513 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 WDFY3Q8IZQ1 3526 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 ABCA7Q8IZY2 2146 aa21.97■■□□□ 1.11
SQSTM1-215ENST00000514093 AKAP13Q12802 2813 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 ANTXRLA6NF34 631 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 CYB561D2O14569 222 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 OGTO15294 1046 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 ADRB2P07550 413 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 CEACAM1P13688 526 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 NCKAP1LP55160 1127 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 ACAP1Q15027 740 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 PDGFRLQ15198 375 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 WSCD1Q658N2 575 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 PMS2CLQ68D20 193 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 METTL23Q86XA0 190 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 THEM5Q8N1Q8 247 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 DEFB124Q8NES8 71 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 SPPL2BQ8TCT7 592 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 CD101Q93033 1021 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 KIF9Q9HAQ2 790 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 TMLHEQ9NVH6 421 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 ZMYM5Q9UJ78 669 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 MYH11P35749 1972 aa21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 ZNF638Q14966 1978 aaKnown RBP21.96■■□□□ 1.11
SQSTM1-215ENST00000514093 HNRNPDLO14979 420 aaKnown RBP21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 BCKDHBP21953 392 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 DDX6P26196 483 aaKnown RBP eCLIP21.95■■□□□ 1.11e-6■□□□□ 10.6
SQSTM1-215ENST00000514093 IRX4P78413 519 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 MTF1Q14872 753 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 KYAT1Q16773 422 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 DTHD1Q6ZMT9 781 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 MON1AQ86VX9 555 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 CPA6Q8N4T0 437 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 SYT2Q8N9I0 419 aaPredicted RBP21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 TSTD1Q8NFU3 115 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 MRPS31Q92665 395 aaKnown RBP21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 CYP2S1Q96SQ9 504 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 PI4K2AQ9BTU6 479 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 MSTO1Q9BUK6 570 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 DUS2Q9NX74 493 aaKnown RBP21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 CPSF3Q9UKF6 684 aaKnown RBP21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 DSEQ9UL01 958 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 WNT6Q9Y6F9 365 aa21.95■■□□□ 1.1
SQSTM1-215ENST00000514093 ANO9A1A5B4 782 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 PLA2G4BP0C869 781 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 CSRP1P21291 193 aaKnown RBP21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 SLC12A3P55017 1021 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 TMEM132DQ14C87 1099 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 USP39Q53GS9 565 aaKnown RBP21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 C2orf15Q8WU43 125 aaKnown RBP21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 ACDQ96AP0 544 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 TSPAN18Q96SJ8 248 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 TRPC7Q9HCX4 862 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 DENND4CQ5VZ89 1909 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 NUP205Q92621 2012 aa21.94■■□□□ 1.1
SQSTM1-215ENST00000514093 A0A0B4J269 797 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 TMEM8BA6NDV4 472 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 PAX3P23760 479 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 SCN1AP35498 2009 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 DHPSP49366 369 aaPredicted RBP21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 SEC13P55735 322 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 C2orf27AQ580R0 203 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 ARSHQ5FYA8 562 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 ANO7Q6IWH7 933 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 CYP2U1Q7Z449 544 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 TTC30AQ86WT1 665 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 OSCP1Q8WVF1 389 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 ZCCHC14Q8WYQ9 949 aaKnown RBP21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 PIGKQ92643 395 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 EXOC4Q96A65 974 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 SLC22A12Q96S37 553 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 LARSQ9P2J5 1176 aaKnown RBP21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 PCDHB5Q9Y5E4 795 aa21.93■■□□□ 1.1
SQSTM1-215ENST00000514093 PRPF40AO75400 957 aaKnown RBP21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 TADA3O75528 432 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 IFNAR2P48551 515 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 ACOT2P49753 483 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 TAF6P49848 677 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 RING1Q06587 406 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 ZNF268Q14587 947 aaPredicted RBP21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 DDR2Q16832 855 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 SLC39A4Q6P5W5 647 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 CD302Q8IX05 232 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 DCP1BQ8IZD4 617 aaKnown RBP21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 LINC00597Q9H2U6 94 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 THADAQ6YHU6 1953 aa21.92■■□□□ 1.1
SQSTM1-215ENST00000514093 H0YCG3 227 aa21.91■■□□□ 1.1
SQSTM1-215ENST00000514093 HYAL3O43820 417 aaPredicted RBP21.91■■□□□ 1.1
SQSTM1-215ENST00000514093 FAM160A1Q05DH4 1040 aa21.91■■□□□ 1.1
SQSTM1-215ENST00000514093 SMARCB1Q12824 385 aa21.91■■□□□ 1.1
SQSTM1-215ENST00000514093 ZNF77Q15935 545 aa21.91■■□□□ 1.1
SQSTM1-215ENST00000514093 EML3Q32P44 896 aa21.91■■□□□ 1.1
SQSTM1-215ENST00000514093 LRSAM1Q6UWE0 723 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms