RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TTC39CQ8N584 583 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 TDRD5Q8NAT2 981 aaKnown RBP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 NELFBQ8WX92 580 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 ERCC4Q92889 916 aaPredicted RBP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 NXPE3Q969Y0 559 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 ZNF707Q96C28 371 aaPredicted RBP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 FUBP3Q96I24 572 aaKnown RBP eCLIP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 XYLT2Q9H1B5 865 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 POMKQ9H5K3 350 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 CYP4F11Q9HBI6 524 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 DDX43Q9NXZ2 648 aaKnown RBP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 ARMCX3Q9UH62 379 aaPredicted RBP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 RWDD2AQ9UIY3 292 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 CDH9Q9ULB4 789 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 L1RE1Q9UN81 338 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 ASB3Q9Y575 518 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 TIMM13Q9Y5L4 95 aaPredicted RBP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 INSL5Q9Y5Q6 135 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 PATJQ8NI35 1801 aa8.77□□□□□ -1.01
NEDD4-210ENST00000513957 ZNF638Q14966 1978 aaKnown RBP8.77□□□□□ -1.01
NEDD4-210ENST00000513957 DOCK6Q96HP0 2047 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 ZNF197O14709 1029 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 P4HA2O15460 535 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 ATMINO43313 823 aaPredicted RBP8.76□□□□□ -1.01
NEDD4-210ENST00000513957 FGF19O95750 216 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 CST3P01034 146 aaPredicted RBP8.76□□□□□ -1.01
NEDD4-210ENST00000513957 ERCC5P28715 1186 aaPredicted RBP8.76□□□□□ -1.01
NEDD4-210ENST00000513957 PIK3CAP42336 1068 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 ALDH1A3P47895 512 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 MXI1P50539 228 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 PMS1P54277 932 aaKnown RBP8.76□□□□□ -1.01
NEDD4-210ENST00000513957 CETN1Q12798 172 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 CAMK4Q16566 473 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 WDR72Q3MJ13 1102 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 CFAP221Q4G0U5 840 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 INTS6LQ5JSJ4 861 aaKnown RBP8.76□□□□□ -1.01
NEDD4-210ENST00000513957 IQCEQ6IPM2 695 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 RNF19BQ6ZMZ0 732 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 C4orf50Q6ZRC1 276 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 RBM43Q6ZSC3 357 aaKnown RBP8.76□□□□□ -1.01
NEDD4-210ENST00000513957 ITIH5Q86UX2 942 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 FBXL13Q8NEE6 735 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 OR10T2Q8NGX3 314 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 PLEKHO2Q8TD55 490 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 TNIP3Q96KP6 325 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 RTP3Q9BQQ7 232 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 CYP3A43Q9HB55 503 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 ZMYM5Q9UJ78 669 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 YIPF1Q9Y548 306 aa8.76□□□□□ -1.01
NEDD4-210ENST00000513957 A0A0C4DFX4 3053 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 TRIM49BA6NDI0 452 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 BIN1O00499 593 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 DLL1O00548 723 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 ATP9BO43861 1147 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 VNN1O95497 513 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 SPATA31D3P0C874 917 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 CCDC192P0DO97 292 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 ALADP13716 330 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 PTPN2P17706 415 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 MAGEA11P43364 429 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 EPHB3P54753 998 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 EPHA5P54756 1037 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 ARPP19P56211 112 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 MYL6P60660 151 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 NOP14P78316 857 aaKnown RBP8.75□□□□□ -1.01
NEDD4-210ENST00000513957 DLG4P78352 724 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 VEPH1Q14D04 833 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 SLC39A12Q504Y0 691 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 C1orf220Q5T0J3 134 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 KLHL10Q6JEL2 608 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 FAM171BQ6P995 826 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 VSTM1Q6UX27 236 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 SPATA31D4Q6ZUB0 917 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 UNC93AQ86WB7 457 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 C12orf76Q8N812 135 aaPredicted RBP8.75□□□□□ -1.01
NEDD4-210ENST00000513957 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 KBTBD7Q8WVZ9 684 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 ZNF512Q96ME7 567 aaPredicted RBP8.75□□□□□ -1.01
NEDD4-210ENST00000513957 MMS19Q96T76 1030 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 SYT15Q9BQS2 421 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 SNX25Q9H3E2 840 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 EHD2Q9NZN4 543 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 IGSF9Q9P2J2 1179 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 EPS15L1Q9UBC2 864 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 CTNND2Q9UQB3 1225 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 COQ4Q9Y3A0 265 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 PCDHB5Q9Y5E4 795 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 MYO10Q9HD67 2058 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 TTC28Q96AY4 2481 aa8.75□□□□□ -1.01
NEDD4-210ENST00000513957 HELZP42694 1942 aaKnown RBP8.74□□□□□ -1.01
NEDD4-210ENST00000513957 ANAPC1Q9H1A4 1944 aa8.74□□□□□ -1.01
NEDD4-210ENST00000513957 SOBPA7XYQ1 873 aa8.74□□□□□ -1.01
NEDD4-210ENST00000513957 CCL16O15467 120 aa8.74□□□□□ -1.01
NEDD4-210ENST00000513957 HLA-DRAP01903 254 aa8.74□□□□□ -1.01
NEDD4-210ENST00000513957 TRIM49P0CI25 452 aa8.74□□□□□ -1.01
NEDD4-210ENST00000513957 TRIM49CP0CI26 452 aa8.74□□□□□ -1.01
NEDD4-210ENST00000513957 NDUFV2P19404 249 aa8.74□□□□□ -1.01
NEDD4-210ENST00000513957 VAMP1P23763 118 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms