RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 COL6A3P12111 3177 aa5.24□□□□□ -1.57
CLDND1-228ENST00000513873 TRIOBPQ9H2D6 2365 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 TMEM127O75204 238 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 SNUPNO95149 360 aaKnown RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 CSF1RP07333 972 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 HSP90AA1P07900 732 aaKnown RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 RBP3P10745 1247 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 GYS1P13807 737 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 PIP4K2AP48426 406 aaPredicted RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 MAN2A2P49641 1150 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 PTH1RQ03431 593 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 ZSCAN25Q6NSZ9 544 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 LDHAL6AQ6ZMR3 332 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 Q6ZSN1 163 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 ELOA2Q8IYF1 753 aaPredicted RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 ZNF34Q8IZ26 560 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 FAM193BQ96PV7 902 aaPredicted RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 C7orf25Q9BPX7 421 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 GPR87Q9BY21 358 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 SENP6Q9GZR1 1112 aaPredicted RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 TMX4Q9H1E5 349 aaPredicted RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 BCO1Q9HAY6 547 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 IL1RAPL2Q9NP60 686 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 CNNM1Q9NRU3 951 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 NARFQ9UHQ1 456 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 ABT1Q9ULW3 272 aaKnown RBP5.23□□□□□ -1.57
CLDND1-228ENST00000513873 RGPD2P0DJD1 1756 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 ADAMTSL1Q8N6G6 1762 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 MROH5Q6ZUA9 1318 aa5.23□□□□□ -1.57
CLDND1-228ENST00000513873 GABRDO14764 452 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 FZD7O75084 574 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 RPLP2P05387 115 aaKnown RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 ZFYP08048 801 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 IFIT1P09914 478 aaKnown RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 UQCRFS1P1P0C7P4 283 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 ZKSCAN1P17029 563 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 ATP5JP18859 108 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 GPTP24298 496 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 ACRV1P26436 265 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 CHRNA5P30532 468 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 MCAMP43121 646 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 EXOSC10Q01780 885 aaKnown RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 RABEP1Q15276 862 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 TTF1Q15361 905 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 MST1LQ2TV78 715 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 FAM214AQ32MH5 1076 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 INAVAQ3KP66 663 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 USP39Q53GS9 565 aaKnown RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 BRDTQ58F21 947 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 METTL24Q5JXM2 366 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 MIGA2Q7L4E1 593 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 SKAP1Q86WV1 359 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 NBPF5PQ86XG9 351 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 C1orf210Q8IVY1 113 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 PQLC1Q8N2U9 271 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 CBARPQ8N350 705 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 OR7D4Q8NG98 312 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 MDM1Q8TC05 714 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 CHMP4CQ96CF2 233 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 NEUROD6Q96NK8 337 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 PDCD2LQ9BRP1 358 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 SIL1Q9H173 461 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 TAF1DQ9H5J8 278 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 MANSC1Q9H8J5 431 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 ZNF277Q9NRM2 450 aaPredicted RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 TMEM140Q9NV12 185 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 TYW1Q9NV66 732 aaKnown RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 GNL3LQ9NVN8 582 aaKnown RBP5.22□□□□□ -1.57
CLDND1-228ENST00000513873 MOCS1Q9NZB8 636 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 FPGT-TNNI3KV9GXZ4 949 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 AKAP11Q9UKA4 1901 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 RAD50Q92878 1312 aa5.22□□□□□ -1.57
CLDND1-228ENST00000513873 SCN11AQ9UI33 1791 aa5.21□□□□□ -1.57
CLDND1-228ENST00000513873 ZNF831Q5JPB2 1677 aa5.21□□□□□ -1.57
CLDND1-228ENST00000513873 B5MCH6 92 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 NDUFS2O75306 463 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 STC2O76061 302 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 RECQL4O94761 1208 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 DDNO94850 711 aaPredicted RBP5.21□□□□□ -1.58
CLDND1-228ENST00000513873 CAMTA2O94983 1202 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 SLC5A1P13866 664 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 CHMLP26374 656 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 KCNJ4P48050 445 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 RFX5P48382 616 aaPredicted RBP5.21□□□□□ -1.58
CLDND1-228ENST00000513873 KRT85P78386 507 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 TFCP2Q12800 502 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 ITPK1Q13572 414 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 PUM3Q15397 648 aaKnown RBP5.21□□□□□ -1.58
CLDND1-228ENST00000513873 HLFQ16534 295 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 ATP2B3Q16720 1220 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 SPDYAQ5MJ70 313 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 TTC39AQ5SRH9 613 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 TMED8Q6PL24 325 aaPredicted RBP5.21□□□□□ -1.58
CLDND1-228ENST00000513873 ZBTB46Q86UZ6 589 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 ANKRD18AQ8IVF6 992 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 MDGA1Q8NFP4 955 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 JADE3Q92613 823 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 SNX21Q969T3 373 aa5.21□□□□□ -1.58
CLDND1-228ENST00000513873 CYFIP2Q96F07 1278 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms