RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 GGA3Q9NZ52 723 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 AASSQ9UDR5 926 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 DNAJB4Q9UDY4 337 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 FETUBQ9UGM5 382 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 SCOCQ9UIL1 159 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 GGT7Q9UJ14 662 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 VPS28Q9UK41 221 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 CPSF3Q9UKF6 684 aaKnown RBP4.18□□□□□ -1.74
AFP-205ENST00000513720 VAV3Q9UKW4 847 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 RNF112Q9ULX5 631 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 C19orf53Q9UNZ5 99 aaPredicted RBP4.18□□□□□ -1.74
AFP-205ENST00000513720 TRIM33Q9UPN9 1127 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 AURKCQ9UQB9 309 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 APOBEC2Q9Y235 224 aaKnown RBP4.18□□□□□ -1.74
AFP-205ENST00000513720 LRCH1Q9Y2L9 728 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 AP3M1Q9Y2T2 418 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 GPR52Q9Y2T5 361 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 DERAQ9Y315 318 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 HBS1LQ9Y450 684 aaKnown RBP4.18□□□□□ -1.74
AFP-205ENST00000513720 PCDHA5Q9Y5H7 936 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 TLL2Q9Y6L7 1015 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 FPGT-TNNI3KV9GXZ4 949 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 TTC21AQ8NDW8 1320 aa4.18□□□□□ -1.74
AFP-205ENST00000513720 ANKRD36BQ8N2N9 1353 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 A0A0J9YVX5 310 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 A0A1W2PQ67 120 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 NUDT19A8MXV4 375 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 MIF4GDA9UHW6 222 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 H3BM21 787 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 H3BUI4 141 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 K7ERQ8 282 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PIK3CDO00329 1044 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 WNT7AO00755 349 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 DPYSL4O14531 572 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 RASGRF2O14827 1237 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PFDN6O15212 129 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 SHOXO15266 292 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 TRAPPC3O43617 180 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 CNOT3O75175 753 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 PEX11AO75192 247 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 SEC22BO75396 215 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 TOM1L1O75674 476 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 SLC22A3O75751 556 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 SERPINI2O75830 405 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PGM3O95394 542 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 ANP32DO95626 131 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 HRGP04196 525 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 CALB1P05937 261 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 ASNSP08243 561 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 KRT16P08779 473 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 COL6A2P12110 1019 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PRG2P13727 222 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 CPEP16870 476 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 FGFR4P22455 802 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PDHA2P29803 388 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 ALDH4A1P30038 563 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 GSTT1P30711 240 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 HOXA6P31267 233 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 HOXA11P31270 313 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 ACSL1P33121 698 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PCK1P35558 622 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 EIF4A3P38919 411 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 IGHMBP2P38935 993 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 IARSP41252 1262 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 KCNJ5P48544 419 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 STAT5BP51692 787 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 SRP54P61011 504 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 GNAI1P63096 354 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PPARAQ07869 468 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 SLFN5Q08AF3 891 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 C19orf57Q0VDD7 668 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 CDC20Q12834 499 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 STK4Q13043 487 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 STX3Q13277 289 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 ZNF177Q13360 481 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 ADAM15Q13444 863 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 MTMR1Q13613 665 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PLS1Q14651 629 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 LPIN1Q14693 890 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 RFTN1Q14699 578 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 NAA30Q147X3 362 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 SF3B4Q15427 424 aaKnown RBP eCLIP4.17□□□□□ -1.743e-6■■■■□ 21.6
AFP-205ENST00000513720 PPP2R5EQ16537 467 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 AANATQ16613 207 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PFKFB3Q16875 520 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 PLA2G4EQ3MJ16 856 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 CCDC58Q4VC31 144 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 LACTB2Q53H82 288 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 FAM209BQ5JX69 171 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 IFIT1BQ5T764 474 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 SLC6A19Q695T7 634 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 ALG1LQ6GMV1 187 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PTRHD1Q6GMV3 140 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 ARMC6Q6NXE6 501 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 MEX3BQ6ZN04 569 aaKnown RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 IDO2Q6ZQW0 420 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 PTCHD4Q6ZW05 846 aa4.17□□□□□ -1.74
AFP-205ENST00000513720 VASH1Q7L8A9 365 aaPredicted RBP4.17□□□□□ -1.74
AFP-205ENST00000513720 TRPM8Q7Z2W7 1104 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms