RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ZNF394Q53GI3 561 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 FBXO47Q5MNV8 452 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 TWF2Q6IBS0 349 aaKnown RBP8.86□□□□□ -0.99
RNF4-220ENST00000513578 DNAJC24Q6P3W2 148 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 SLC13A5Q86YT5 568 aaPredicted RBP8.86□□□□□ -0.99
RNF4-220ENST00000513578 C12orf50Q8NA57 414 aaPredicted RBP8.86□□□□□ -0.99
RNF4-220ENST00000513578 EXD1Q8NHP7 514 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 SPATA18Q8TC71 538 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 CD99L2Q8TCZ2 262 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 PPP1R13LQ8WUF5 828 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 HDAC7Q8WUI4 952 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 SLCO2A1Q92959 643 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 WNT8BQ93098 351 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 CAVIN3Q969G5 261 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 C18orf8Q96DM3 657 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 DDX27Q96GQ7 796 aaKnown RBP8.86□□□□□ -0.99
RNF4-220ENST00000513578 BTBD6Q96KE9 485 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 CXCL16Q9H2A7 254 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 UBN1Q9NPG3 1134 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 FAM105AQ9NUU6 356 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 PARP2Q9UGN5 583 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 PCYOX1Q9UHG3 505 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 MTUS1Q9ULD2 1270 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 HES2Q9Y543 173 aa8.86□□□□□ -0.99
RNF4-220ENST00000513578 KPNA7A9QM74 516 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 PTGESO14684 152 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 RAD51CO43502 376 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 FKTNO75072 461 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 TRPA1O75762 1119 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 HEXIM1O94992 359 aaKnown RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 GLI1P08151 1106 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 PYGMP11217 842 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 ITGA4P13612 1032 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 WARSP23381 471 aaKnown RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 RPL9P32969 192 aaKnown RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 PTPN7P35236 360 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 SCNN1AP37088 669 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 MARCKSL1P49006 195 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 COPS2P61201 443 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 PAK2Q13177 524 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 ITGA7Q13683 1181 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 SIX1Q15475 284 aaPredicted RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 SOWAHAQ2M3V2 549 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 FAM47CQ5HY64 1035 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 LHX8Q68G74 356 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 ARCQ7LC44 396 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 POLNQ7Z5Q5 900 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 XYLT1Q86Y38 959 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 ZDHHC17Q8IUH5 632 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 MREGQ8N565 214 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 ARRDC4Q8NCT1 418 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 RAET1EQ8TD07 263 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 C18orf25Q96B23 403 aaPredicted RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 HEXIM2Q96MH2 286 aaKnown RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 MRPL45Q9BRJ2 306 aaKnown RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 SLC4A5Q9BY07 1137 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 ACBD3Q9H3P7 528 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 LRRC19Q9H756 370 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 HOMER3Q9NSC5 361 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 HMGXB4Q9UGU5 601 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 CHORDC1Q9UHD1 332 aaPredicted RBP8.85□□□□□ -0.99
RNF4-220ENST00000513578 CYTH4Q9UIA0 394 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 SNX9Q9Y5X1 595 aa8.85□□□□□ -0.99
RNF4-220ENST00000513578 TSC2P49815 1807 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 A0A0U1RQF3 1178 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PODXLO00592 558 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 GABRDO14764 452 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PPEF2O14830 753 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 SASH3O75995 380 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PFKMP08237 780 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 KRT3P12035 628 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 GBP1P32455 592 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 CETN2P41208 172 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PTGIRP43119 386 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 FNTAP49354 379 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 LILRA4P59901 499 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 RNASE9P60153 205 aaKnown RBP8.84□□□□□ -0.99
RNF4-220ENST00000513578 SOX4Q06945 474 aaPredicted RBP8.84□□□□□ -0.99
RNF4-220ENST00000513578 ZNF252P-AS1Q0IIN9 211 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PDCLQ13371 301 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 ZNF211Q13398 564 aaPredicted RBP8.84□□□□□ -0.99
RNF4-220ENST00000513578 CASP8Q14790 479 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PTPROQ16827 1216 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 GLRA4Q5JXX5 417 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 LLGL2Q6P1M3 1020 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 DCUN1D2Q6PH85 259 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 TMEM110Q86TL2 294 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 CPNE8Q86YQ8 564 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 KLHL7Q8IXQ5 586 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 RCOR2Q8IZ40 523 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 KRT222Q8N1A0 295 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 TMEM86AQ8N2M4 240 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 TMEM130Q8N3G9 435 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PIP4P2Q8N4L2 257 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 PRELID2Q8N945 189 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 GSTCDQ8NEC7 633 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 APPL2Q8NEU8 664 aa8.84□□□□□ -0.99
RNF4-220ENST00000513578 IPO4Q8TEX9 1081 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms