RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 MYRFLQ96LU7 910 aa27.14■■□□□ 1.94
CLDND1-226ENST00000513287 ZSCAN16Q9H4T2 348 aaPredicted RBP27.14■■□□□ 1.94
CLDND1-226ENST00000513287 RBAKQ9NYW8 714 aaPredicted RBP27.14■■□□□ 1.94
CLDND1-226ENST00000513287 UXTQ9UBK9 157 aaPredicted RBP27.14■■□□□ 1.94
CLDND1-226ENST00000513287 MED19A0JLT2 244 aaPredicted RBP27.13■■□□□ 1.93
CLDND1-226ENST00000513287 ITGB3P05106 788 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 POLR2BP30876 1174 aaKnown RBP27.13■■□□□ 1.93
CLDND1-226ENST00000513287 AVPR1AP37288 418 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 RPL10AP62906 217 aaKnown RBP27.13■■□□□ 1.93
CLDND1-226ENST00000513287 TFAMQ00059 246 aaKnown RBP27.13■■□□□ 1.93
CLDND1-226ENST00000513287 MON1AQ86VX9 555 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 TOP6BLQ8N6T0 577 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 PKMYT1Q99640 499 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 TDP1Q9NUW8 608 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 L1RE1Q9UN81 338 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 AGAP1Q9UPQ3 857 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 OBSL1O75147 1896 aa27.13■■□□□ 1.93
CLDND1-226ENST00000513287 CCDC163A0A0D9SF12 145 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 GABRDO14764 452 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 FOXD2O60548 495 aaPredicted RBP27.12■■□□□ 1.93
CLDND1-226ENST00000513287 LHX1P48742 406 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 CASP5P51878 434 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 WNT7BP56706 349 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 AMPD2Q01433 879 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 MYL7Q01449 175 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 PON2Q15165 354 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 CFAP221Q4G0U5 840 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 INTS6LQ5JSJ4 861 aaKnown RBP27.12■■□□□ 1.93
CLDND1-226ENST00000513287 GPIHBP1Q8IV16 184 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 SYCP3Q8IZU3 236 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 FUBP3Q96I24 572 aaKnown RBP eCLIP27.12■■□□□ 1.93
CLDND1-226ENST00000513287 RTKNQ9BST9 563 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 GKN1Q9NS71 199 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 RBM12Q9NTZ6 932 aaKnown RBP27.12■■□□□ 1.93
CLDND1-226ENST00000513287 PANK4Q9NVE7 773 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 TMLHEQ9NVH6 421 aa27.12■■□□□ 1.93
CLDND1-226ENST00000513287 DDX43Q9NXZ2 648 aaKnown RBP27.12■■□□□ 1.93
CLDND1-226ENST00000513287 ZNF638Q14966 1978 aaKnown RBP27.11■■□□□ 1.93
CLDND1-226ENST00000513287 TRDMT1O14717 391 aaKnown RBP27.11■■□□□ 1.93
CLDND1-226ENST00000513287 HRO43593 1189 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 PRPF40AO75400 957 aaKnown RBP27.11■■□□□ 1.93
CLDND1-226ENST00000513287 STAT6P42226 847 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 ATXN1P54253 815 aaKnown RBP27.11■■□□□ 1.93
CLDND1-226ENST00000513287 RBP5P82980 135 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 TNK2Q07912 1038 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 RUNX3Q13761 415 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 LIMS2Q7Z4I7 341 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 CSGALNACT2Q8N6G5 542 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 MRPS31Q92665 395 aaKnown RBP27.11■■□□□ 1.93
CLDND1-226ENST00000513287 USP13Q92995 863 aaPredicted RBP27.11■■□□□ 1.93
CLDND1-226ENST00000513287 SAAL1Q96ER3 474 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 CEP295NLQ96MC4 621 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 LRRC27Q9C0I9 530 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 TBC1D7Q9P0N9 293 aa27.11■■□□□ 1.93
CLDND1-226ENST00000513287 NOL4O94818 638 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 IDEP14735 1019 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 SIM2Q14190 667 aaPredicted RBP27.1■■□□□ 1.93
CLDND1-226ENST00000513287 SURF1Q15526 300 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 TMEM196Q5HYL7 178 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 Q6ZS52 159 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 STXBP4Q6ZWJ1 553 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 WDR5BQ86VZ2 330 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 MAB21L3Q8N8X9 362 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 ZSWIM2Q8NEG5 633 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 PARD6AQ9NPB6 346 aa27.1■■□□□ 1.93
CLDND1-226ENST00000513287 PCSK1P29120 753 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 NASPP49321 788 aaPredicted RBP27.09■■□□□ 1.93
CLDND1-226ENST00000513287 BFSP1Q12934 665 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 FAM173BQ6P4H8 233 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 FAM171BQ6P995 826 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 CCDC65Q8IXS2 484 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 GPD1LQ8N335 351 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 USP28Q96RU2 1077 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 CBWD1Q9BRT8 395 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 PI4K2AQ9BTU6 479 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 TNMDQ9H2S6 317 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 HPS4Q9NQG7 708 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 CDV3Q9UKY7 258 aaKnown RBP27.09■■□□□ 1.93
CLDND1-226ENST00000513287 USP18Q9UMW8 372 aa27.09■■□□□ 1.93
CLDND1-226ENST00000513287 A0A087X0B3 334 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 CHURC1-FNTBB4DL54 471 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 ATG13O75143 517 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 MAGEA11P43364 429 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 FNTBP49356 437 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 PDGFRLQ15198 375 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 CUEDC2Q9H467 287 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 KIAA1586Q9HCI6 787 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 PDE11AQ9HCR9 933 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 SIX4Q9UIU6 781 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 MTMR6Q9Y217 621 aa27.08■■□□□ 1.93
CLDND1-226ENST00000513287 GRSF1Q12849 480 aaKnown RBP eCLIP27.07■■□□□ 1.92
CLDND1-226ENST00000513287 MYO1EQ12965 1108 aa27.07■■□□□ 1.92
CLDND1-226ENST00000513287 CSRP2Q16527 193 aa27.07■■□□□ 1.92
CLDND1-226ENST00000513287 TXNDC8Q6A555 127 aa27.07■■□□□ 1.92
CLDND1-226ENST00000513287 CNNM4Q6P4Q7 775 aa27.07■■□□□ 1.92
CLDND1-226ENST00000513287 TTC8Q8TAM2 541 aa27.07■■□□□ 1.92
CLDND1-226ENST00000513287 EXOC4Q96A65 974 aa27.07■■□□□ 1.92
CLDND1-226ENST00000513287 SMG9Q9H0W8 520 aaKnown RBP27.07■■□□□ 1.92
CLDND1-226ENST00000513287 INTS13Q9NVM9 706 aa27.07■■□□□ 1.92
CLDND1-226ENST00000513287 KBTBD4Q9NVX7 518 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms