RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 ARHGAP29Q52LW3 1261 aa17.6■□□□□ 0.41
HMGCL-209ENST00000513148 MIIPQ5JXC2 388 aa17.6■□□□□ 0.41
HMGCL-209ENST00000513148 THEM5Q8N1Q8 247 aa17.6■□□□□ 0.41
HMGCL-209ENST00000513148 EFHBQ8N7U6 833 aa17.6■□□□□ 0.41
HMGCL-209ENST00000513148 UBXN4Q92575 508 aa17.6■□□□□ 0.41
HMGCL-209ENST00000513148 VPS16Q9H269 839 aa17.6■□□□□ 0.41
HMGCL-209ENST00000513148 GCNT4Q9P109 453 aa17.6■□□□□ 0.41
HMGCL-209ENST00000513148 BARX2Q9UMQ3 279 aaPredicted RBP17.6■□□□□ 0.41
HMGCL-209ENST00000513148 WEE2P0C1S8 567 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 ATP1A3P13637 1013 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 VWA3BQ502W6 1294 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 SLC8B1Q6J4K2 584 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 SYT10Q6XYQ8 523 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 DPH6Q7L8W6 267 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 OR6B3Q8NGW1 331 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 TATDN2Q93075 761 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 PGLYRP2Q96PD5 576 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 NIF3L1Q9GZT8 377 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 SDCBP2Q9H190 292 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 NDST4Q9H3R1 872 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.59■□□□□ 0.41
HMGCL-209ENST00000513148 WDR27A2RRH5 827 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 PDGFRBP09619 1106 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 ZNF18P17022 549 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 ICE2Q659A1 982 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 PRDM6Q9NQX0 595 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 MAN1C1Q9NR34 630 aa17.59■□□□□ 0.41
HMGCL-209ENST00000513148 OR6C75A6NL08 312 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 P4HA2O15460 535 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 TBX10O75333 385 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 IVLP07476 585 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 CD58P19256 250 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 LMO2P25791 158 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 LHX1P48742 406 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 PSMC1P62191 440 aaKnown RBP17.58■□□□□ 0.4
HMGCL-209ENST00000513148 DLX2Q07687 328 aaPredicted RBP17.58■□□□□ 0.4
HMGCL-209ENST00000513148 RAB33AQ14088 237 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 CCDC142Q17RM4 750 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 LIMS2Q7Z4I7 341 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 ANKRD20A12PQ8NF67 263 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 SLC22A17Q8WUG5 538 aa17.58■□□□□ 0.4
HMGCL-209ENST00000513148 PABPC5Q96DU9 382 aaKnown RBP17.58■□□□□ 0.4
HMGCL-209ENST00000513148 INTS2Q9H0H0 1204 aaKnown RBP17.58■□□□□ 0.4
HMGCL-209ENST00000513148 GABRDO14764 452 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 PMM2O15305 246 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 TACC1O75410 805 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 WARSP23381 471 aaKnown RBP17.57■□□□□ 0.4
HMGCL-209ENST00000513148 GNL1P36915 607 aaPredicted RBP17.57■□□□□ 0.4
HMGCL-209ENST00000513148 ADAM15Q13444 863 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 KCNC3Q14003 757 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 CLUL1Q15846 466 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 SLC39A12Q504Y0 691 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 E4F1Q66K89 784 aaPredicted RBP17.57■□□□□ 0.4
HMGCL-209ENST00000513148 RNF19BQ6ZMZ0 732 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 SRLQ86TD4 932 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 APOL5Q9BWW9 433 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 A8MXQ7 604 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 ETF1P62495 437 aaKnown RBP17.57■□□□□ 0.4
HMGCL-209ENST00000513148 TSPY1Q01534 308 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 ORC1Q13415 861 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 CTC1Q2NKJ3 1217 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 LMO3Q8TAP4 145 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 PPP1R13BQ96KQ4 1090 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 NT5C1BQ96P26 610 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 BCO2Q9BYV7 579 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 DPEP3Q9H4B8 488 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 HMGXB4Q9UGU5 601 aa17.57■□□□□ 0.4
HMGCL-209ENST00000513148 MTCL1Q9Y4B5 1905 aaKnown RBP17.56■□□□□ 0.4
HMGCL-209ENST00000513148 H3BQ06 376 aaPredicted RBP17.56■□□□□ 0.4
HMGCL-209ENST00000513148 NCK2O43639 380 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 ATP2C2O75185 946 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 SRGAP2BP0DMP2 458 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 KCNA5P22460 613 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 PCSK1P29120 753 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 APBA1Q02410 837 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 ADCY1Q08828 1119 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 EXOC3L4Q17RC7 722 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 GBP6Q6ZN66 633 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 LRRTM3Q86VH5 581 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 KREMEN2Q8NCW0 462 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 CASP10Q92851 521 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 SYT15Q9BQS2 421 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 ACBD6Q9BR61 282 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 OXCT2Q9BYC2 517 aaPredicted RBP17.56■□□□□ 0.4
HMGCL-209ENST00000513148 ZCWPW1Q9H0M4 648 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 UBE2ZQ9H832 354 aaPredicted RBP17.56■□□□□ 0.4
HMGCL-209ENST00000513148 LIMA1Q9UHB6 759 aaKnown RBP17.56■□□□□ 0.4
HMGCL-209ENST00000513148 BRWD1Q9NSI6 2320 aa17.56■□□□□ 0.4
HMGCL-209ENST00000513148 SLC9A1P19634 815 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 LTBRP36941 435 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 COPB1P53618 953 aaKnown RBP17.55■□□□□ 0.4
HMGCL-209ENST00000513148 INTS6LQ5JSJ4 861 aaKnown RBP17.55■□□□□ 0.4
HMGCL-209ENST00000513148 LILRA6Q6PI73 481 aa17.55■□□□□ 0.4
HMGCL-209ENST00000513148 TRIM65Q6PJ69 517 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms