RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PGS1Q32NB8 556 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 MTX3Q5HYI7 312 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 CEP78Q5JTW2 689 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 EPHA10Q5JZY3 1008 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 TREML2Q5T2D2 321 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 FAM160B1Q5W0V3 765 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF626Q68DY1 528 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 PTF1AQ7RTS3 328 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 DTX2Q86UW9 622 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF280BQ86YH2 543 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 VGLL2Q8N8G2 317 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 RGMAQ96B86 450 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 ALG8Q9BVK2 526 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 C1QTNF7Q9BXJ2 289 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 WDCPQ9H6R7 721 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 ARMT1Q9H993 441 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 PNPOQ9NVS9 261 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 SH3BP4Q9P0V3 963 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 ZDHHC8Q9ULC8 765 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 MRPS17Q9Y2R5 130 aaKnown RBP2.98□□□□□ -1.93
PDGFC-208ENST00000512711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.98□□□□□ -1.93
PDGFC-208ENST00000512711 COL4A3BPQ9Y5P4 624 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 H0YIZ8 118 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 SMIM22K7EJ46 135 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 SLC16A6O15403 523 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 IL33O95760 270 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 FESP07332 822 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 CYP2D6P10635 497 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 PIM1P11309 404 aaPredicted RBP2.97□□□□□ -1.93
PDGFC-208ENST00000512711 ITGB6P18564 788 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 CLCN2P51788 898 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 LILRA4P59901 499 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 PROSER3Q2NL68 480 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 SUPT20HL1Q3ZLR7 823 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF551Q7Z340 670 aaPredicted RBP2.97□□□□□ -1.93
PDGFC-208ENST00000512711 COL23A1Q86Y22 540 aaPredicted RBP2.97□□□□□ -1.93
PDGFC-208ENST00000512711 SMG7Q92540 1137 aaKnown RBP2.97□□□□□ -1.93
PDGFC-208ENST00000512711 HSPBAP1Q96EW2 488 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 MVB12AQ96EY5 273 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 CAMKK2Q96RR4 588 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 FLRT1Q9NZU1 646 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 HESX1Q9UBX0 185 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF70Q9UC06 446 aaPredicted RBP2.97□□□□□ -1.93
PDGFC-208ENST00000512711 IP6K2Q9UHH9 426 aa2.97□□□□□ -1.93
PDGFC-208ENST00000512711 LINC01548A6NM66 108 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 PRRT4C9JH25 899 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 GCOM1H8Y6P7 765 aaPredicted RBP2.96□□□□□ -1.94
PDGFC-208ENST00000512711 UNC5CO95185 931 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 ARIH2O95376 493 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 NDUFB7P17568 137 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 SFPQP23246 707 aaKnown RBP eCLIP2.96□□□□□ -1.94
PDGFC-208ENST00000512711 ALDH9A1P49189 494 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 SOX8P57073 446 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 CYP4F2P78329 520 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 KLF9Q13886 244 aaPredicted RBP2.96□□□□□ -1.94
PDGFC-208ENST00000512711 ZNF267Q14586 743 aaPredicted RBP2.96□□□□□ -1.94
PDGFC-208ENST00000512711 LLGL1Q15334 1064 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 LY6KQ17RY6 165 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 LONRF3Q496Y0 759 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 KHDC1LQ5JSQ8 128 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 PLAC9Q5JTB6 97 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 THEMIS2Q5TEJ8 643 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 ARHGAP40Q5TG30 622 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 ICE2Q659A1 982 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 C11orf87Q6NUJ2 197 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 NAPRTQ6XQN6 538 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 FANCBQ8NB91 859 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 ATG4AQ8WYN0 398 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 HPS3Q969F9 1004 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 SLC35A4Q96G79 324 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 GPATCH3Q96I76 525 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 NT5C1BQ96P26 610 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 NELL2Q99435 816 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 CPA4Q9UI42 421 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 SPEF1Q9Y4P9 236 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.96□□□□□ -1.94
PDGFC-208ENST00000512711 FER1L4A9Z1Z3 1794 aa2.96□□□□□ -1.94
PDGFC-208ENST00000512711 A1L4Q6 167 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 ERC2O15083 957 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 SOAT2O75908 522 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 JTBO76095 146 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 PDE8BO95263 885 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 VNN1O95497 513 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 GNAI2P04899 355 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 ENGP17813 658 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 KELP23276 732 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 PXNP49023 591 aaPredicted RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 PDE1AP54750 535 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 UCP3P55916 312 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 EEFSECP57772 596 aaKnown RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 IQCB1Q15051 598 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 ETFDHQ16134 617 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 ZIK1Q3SY52 487 aaPredicted RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 SLC44A4Q53GD3 710 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 CCDC157Q569K6 752 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 PCID2Q5JVF3 399 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 PRAMEF17Q5VTA0 474 aa2.95□□□□□ -1.94
PDGFC-208ENST00000512711 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 RGS7BPQ6MZT1 257 aaPredicted RBP2.95□□□□□ -1.94
PDGFC-208ENST00000512711 CEP85Q6P2H3 762 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms