RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 GPR62Q9BZJ7 368 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 VPS16Q9H269 839 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 POLD4Q9HCU8 107 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 KMT5AQ9NQR1 393 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 KANSL3Q9P2N6 904 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 MYO6Q9UM54 1294 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 PDCD11Q14690 1871 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 AKAP3O75969 853 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 EFEMP2O95967 443 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 SKILP12757 684 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 GLRA2P23416 452 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 CNR2P34972 360 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 PEX3P56589 373 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 POU5F1Q01860 360 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 KCNA1Q09470 495 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 GAS6Q14393 721 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 MEA1Q16626 185 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 CCDC40Q4G0X9 1142 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 ZC2HC1CQ53FD0 456 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 HSP90AA4PQ58FG1 418 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 LIN9Q5TKA1 542 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 TANGO2Q6ICL3 276 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 C19orf48Q6RUI8 117 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 INTS8Q75QN2 995 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 LONP2Q86WA8 852 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 BSNDQ8WZ55 320 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 SYN2Q92777 582 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 SLC35C1Q96A29 364 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 NUCKS1Q9H1E3 243 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 C2orf40Q9H1Z8 148 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 BRD9Q9H8M2 597 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 KIAA1586Q9HCI6 787 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 PLCB1Q9NQ66 1216 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 CHST7Q9NS84 486 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 MIOSQ9NXC5 875 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 WASF3Q9UPY6 502 aa11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 CNOT1A5YKK6 2376 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-217ENST00000512274 MAN2B1O00754 1011 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 CCP110O43303 1012 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 ECI2O75521 394 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 TUBB4AP04350 444 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 C8AP07357 584 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 ZBED6P86452 979 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 CDC42EP1Q00587 391 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 PCBP1Q15365 356 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 TCEAL6Q6IPX3 200 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 FUT10Q6P4F1 479 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 RHPN2Q8IUC4 686 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 KSR1Q8IVT5 923 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 XXYLT1Q8NBI6 393 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 TCEAL3Q969E4 200 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 RBM12Q9NTZ6 932 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 C2orf42Q9NWW7 574 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 FBXW11Q9UKB1 542 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 FRMD4BQ9Y2L6 1034 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 SDK1Q7Z5N4 2213 aa11.28□□□□□ -0.6
PDLIM5-217ENST00000512274 COL4A2P08572 1712 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 K7ESF4 209 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 SLC16A4O15374 487 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 XYLBO75191 536 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 AFPP02771 609 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 HNRNPA1P09651 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 GTF2H1P32780 548 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 SCNN1GP51170 649 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 LRMPQ12912 555 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 BFSP1Q12934 665 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 SYCP1Q15431 976 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 FAM187BQ17R55 369 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 PABPC1LQ4VXU2 614 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 SLFN12LQ6IEE8 588 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 KIAA1211LQ6NV74 962 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 MAEAQ7L5Y9 396 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 MRPL10Q7Z7H8 261 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 USP37Q86T82 979 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 KBTBD6Q86V97 674 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 FMNL3Q8IVF7 1028 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 FAM186BQ8IYM0 893 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 SYCP3Q8IZU3 236 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 OR8K1Q8NGG5 319 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 ASAP3Q8TDY4 903 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 DNASE1L2Q92874 299 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 TMEM143Q96AN5 459 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 343.4 ms