RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SLC41A1Q8IVJ1 513 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 MARVELD3Q96A59 401 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 TDP1Q9NUW8 608 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 KIAA1522Q9P206 1035 aaPredicted RBP9.95□□□□□ -0.82
NUP54-211ENST00000512151 WNT6Q9Y6F9 365 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 NID2Q14112 1375 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 KNTC1P50748 2209 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 COL5A1P20908 1838 aaPredicted RBP9.94□□□□□ -0.82
NUP54-211ENST00000512151 M0QZQ0 153 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 TLX3O43711 291 aaPredicted RBP9.94□□□□□ -0.82
NUP54-211ENST00000512151 MARCH6O60337 910 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 KLF8O95600 359 aaPredicted RBP9.94□□□□□ -0.82
NUP54-211ENST00000512151 KCNE1P15382 129 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 CDC25CP30307 473 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 EIF2S3P41091 472 aaKnown RBP9.94□□□□□ -0.82
NUP54-211ENST00000512151 GRM5P41594 1212 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 DPP6P42658 865 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 YWHAHQ04917 246 aaPredicted RBP9.94□□□□□ -0.82
NUP54-211ENST00000512151 EML3Q32P44 896 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 BLIDQ8IZY5 108 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 CPA6Q8N4T0 437 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 ALLCQ8N6M5 410 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 WHAMMQ8TF30 809 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 GIPC2Q8TF65 315 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 HMGB4Q8WW32 186 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 SPACA7Q96KW9 195 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 FCRL3Q96P31 734 aaPredicted RBP9.94□□□□□ -0.82
NUP54-211ENST00000512151 RNF26Q9BY78 433 aaPredicted RBP9.94□□□□□ -0.82
NUP54-211ENST00000512151 C22orf23Q9BZE7 217 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 CDT1Q9H211 546 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 LINC00597Q9H2U6 94 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 POLD4Q9HCU8 107 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 ZDHHC4Q9NPG8 344 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 SH3GLB2Q9NR46 395 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 SLC38A7Q9NVC3 462 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 TUBGCP4Q9UGJ1 667 aa9.94□□□□□ -0.82
NUP54-211ENST00000512151 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 ADAM23O75077 832 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 REC8O95072 547 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 F11P03951 625 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 MARCKSP29966 332 aaPredicted RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 HSPA4P34932 840 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 AVPR1AP37288 418 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 AKAP17AQ02040 695 aaKnown RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 RPL6Q02878 288 aaKnown RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 ZNF33AQ06730 810 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 BFSP1Q12934 665 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 MTF1Q14872 753 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 ZNF77Q15935 545 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 EMC10Q5UCC4 262 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 ITIH5Q86UX2 942 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 IL17RCQ8NAC3 791 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 TXNDC5Q8NBS9 432 aaKnown RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 STKLD1Q8NE28 680 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 BAHD1Q8TBE0 780 aaPredicted RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 OSCP1Q8WVF1 389 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 MYO18AQ92614 2054 aaKnown RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 KCNB2Q92953 911 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 AIFM3Q96NN9 605 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 SEPT5Q99719 369 aaPredicted RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 SEMA4CQ9C0C4 833 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 C2orf40Q9H1Z8 148 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 IL21RQ9HBE5 538 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 DUS2Q9NX74 493 aaKnown RBP9.93□□□□□ -0.82
NUP54-211ENST00000512151 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 CITO14578 2027 aa9.93□□□□□ -0.82
NUP54-211ENST00000512151 MGAQ8IWI9 3026 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 OR6C75A6NL08 312 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 GOLGA8CPA6NN73 597 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 EPB41L2O43491 1005 aaKnown RBP9.92□□□□□ -0.82
NUP54-211ENST00000512151 ALDH1A2O94788 518 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 SYPP08247 313 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 HMGA1P17096 107 aaKnown RBP9.92□□□□□ -0.82
NUP54-211ENST00000512151 YARSP54577 528 aaKnown RBP9.92□□□□□ -0.82
NUP54-211ENST00000512151 NLRP12P59046 1061 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 KCNC4Q03721 635 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 PPP4R3AQ6IN85 833 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 TTC16Q8NEE8 873 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 OR10T2Q8NGX3 314 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 EXOC4Q96A65 974 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 GCNAQ96QF7 691 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 SLC22A12Q96S37 553 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 CCDC94Q9BW85 323 aaPredicted RBP9.92□□□□□ -0.82
NUP54-211ENST00000512151 KIF9Q9HAQ2 790 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 PRDM16Q9HAZ2 1276 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 NCOA5Q9HCD5 579 aaKnown RBP9.92□□□□□ -0.82
NUP54-211ENST00000512151 PTPRHQ9HD43 1115 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 BCCIPQ9P287 314 aaKnown RBP eCLIP9.92□□□□□ -0.82
NUP54-211ENST00000512151 TNFSF13BQ9Y275 285 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 SNX14Q9Y5W7 946 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 KNL1Q8NG31 2342 aa9.92□□□□□ -0.82
NUP54-211ENST00000512151 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 TCRBV21S2A2A0A5A6 115 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 ABLIM1O14639 778 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms