RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ADRB2P07550 413 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 HAPLN1P10915 354 aaPredicted RBP20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 ODC1P11926 461 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 AVPR1AP37288 418 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 TUFMP49411 452 aaKnown RBP20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 STRN3Q13033 797 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 ORC2Q13416 577 aaPredicted RBP20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 VEPH1Q14D04 833 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 UAP1L1Q3KQV9 507 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 SPATA1Q5VX52 437 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 C9orf57Q5W0N0 161 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 GCNAQ96QF7 691 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 ECT2Q9H8V3 914 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 C17orf75Q9HAS0 396 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 DNM3Q9UQ16 869 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 ADAMTS20P59510 1910 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 PLS3P13797 630 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 HNRNPLP14866 589 aaKnown RBP eCLIP20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 BFSP1Q12934 665 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 FBXO43Q4G163 708 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 SDHAF4Q5VUM1 108 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 JADE1Q6IE81 842 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 SLC22A12Q96S37 553 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 TMLHEQ9NVH6 421 aa20.59■□□□□ 0.89
HMGCS1-206ENST00000511774 NPHP3-ACAD11A0A0J9YXS1 232 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 SOBPA7XYQ1 873 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 PIRO00625 290 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 NFICP08651 508 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 GUCY2CP25092 1073 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 MATR3P43243 847 aaKnown RBP eCLIP20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 PDIA5Q14554 519 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 ANKRD1Q15327 319 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 CYP2U1Q7Z449 544 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 RASSF3Q86WH2 238 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 CD101Q93033 1021 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 WNT6Q9Y6F9 365 aa20.58■□□□□ 0.89
HMGCS1-206ENST00000511774 FLNBO75369 2602 aaKnown RBP20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 SPAARA0A1B0GVQ0 90 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 ANO9A1A5B4 782 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 CAPNS1P04632 268 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 TOB1P50616 345 aaPredicted RBP20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 PSMD2Q13200 908 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 PDGFRLQ15198 375 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 ZNF77Q15935 545 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 MON1AQ86VX9 555 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 FRMD1Q8N878 549 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 TSTD1Q8NFU3 115 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 PIGKQ92643 395 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 KIF9Q9HAQ2 790 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 ABI2Q9NYB9 513 aaPredicted RBP20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 NEUROG3Q9Y4Z2 214 aa20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 HELZP42694 1942 aaKnown RBP20.57■□□□□ 0.88
HMGCS1-206ENST00000511774 BPTFQ12830 3046 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 HELZ2Q9BYK8 2649 aaKnown RBP20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 DHPSP49366 369 aaPredicted RBP20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 ZNF268Q14587 947 aaPredicted RBP20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 MTF1Q14872 753 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 TAF12Q16514 161 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 EML3Q32P44 896 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 WSCD1Q658N2 575 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 ANO7Q6IWH7 933 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 SLC39A4Q6P5W5 647 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 SFTPA1Q8IWL2 248 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 MDGA1Q8NFP4 955 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 USP33Q8TEY7 942 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 ACDQ96AP0 544 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 CYP2S1Q96SQ9 504 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 TMEM74BQ9NUR3 256 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 MSRB2Q9Y3D2 182 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 MYOFQ9NZM1 2061 aa20.56■□□□□ 0.88
HMGCS1-206ENST00000511774 MYO18AQ92614 2054 aaKnown RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 K7EQS6 105 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 CHRM1P11229 460 aaPredicted RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 DDX6P26196 483 aaKnown RBP eCLIP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 SEC13P55735 322 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 USP4Q13107 963 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 GAB4Q2WGN9 574 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 USP39Q53GS9 565 aaKnown RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 CC2D1AQ6P1N0 951 aaPredicted RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 PIP4P1Q86T03 277 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 CPA6Q8N4T0 437 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 SPPL2BQ8TCT7 592 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 OSCP1Q8WVF1 389 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 RLN3Q8WXF3 142 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 FAM212AQ96EL1 285 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 PNMA5Q96PV4 448 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 LINC00597Q9H2U6 94 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 FOXP1Q9H334 677 aaPredicted RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 RPF1Q9H9Y2 349 aaKnown RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 DUS2Q9NX74 493 aaKnown RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 ZMYM5Q9UJ78 669 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 MAGED2Q9UNF1 606 aaPredicted RBP20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 PCDHB6Q9Y5E3 794 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 APC2O95996 2303 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 PLXND1Q9Y4D7 1925 aa20.55■□□□□ 0.88
HMGCS1-206ENST00000511774 ACACAQ13085 2346 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 CYB561D2O14569 222 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 OGTO15294 1046 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms