RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ASAH2Q9NR71 780 aa17.28■□□□□ 0.36
PDLIM5-216ENST00000511767 ABI2Q9NYB9 513 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-216ENST00000511767 WNT16Q9UBV4 365 aa17.28■□□□□ 0.36
PDLIM5-216ENST00000511767 MAN1B1Q9UKM7 699 aa17.28■□□□□ 0.36
PDLIM5-216ENST00000511767 CDH9Q9ULB4 789 aa17.28■□□□□ 0.36
PDLIM5-216ENST00000511767 CETN3O15182 167 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 BMP6P22004 513 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 PMS1P54277 932 aaKnown RBP17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 GPC5P78333 572 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 PPP3CAQ08209 521 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 CCDC142Q17RM4 750 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 FAM78AQ5JUQ0 283 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 GAREM2Q75VX8 874 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 MTSS1LQ765P7 747 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 FAM186BQ8IYM0 893 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 GIPC2Q8TF65 315 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 ELMO3Q96BJ8 720 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 EEF2KMTQ96G04 330 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 SEPT5Q99719 369 aaPredicted RBP17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 GPR88Q9GZN0 384 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 IL21Q9HBE4 155 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 ABCB6Q9NP58 842 aa17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 NXF1Q9UBU9 619 aaKnown RBP17.27■□□□□ 0.36
PDLIM5-216ENST00000511767 PPP1R3GB7ZBB8 358 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 ECI2O75521 394 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 SRFP11831 508 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 HMGA1P17096 107 aaKnown RBP17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 NPR3P17342 541 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 CDH8P55286 799 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 UBE2HP62256 183 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 TEAD2Q15562 447 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 CFAP221Q4G0U5 840 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 ZC3H3Q8IXZ2 948 aaKnown RBP17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 OR6B3Q8NGW1 331 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 GPR152Q8TDT2 470 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 SYT15Q9BQS2 421 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 MKNK1Q9BUB5 465 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 SNX25Q9H3E2 840 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 SLC2A4RGQ9NR83 387 aa17.26■□□□□ 0.35
PDLIM5-216ENST00000511767 A0A1W2PRU2 124 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 KRT13P13646 458 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 PTPN1P18031 435 aaKnown RBP17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 AVPR2P30518 371 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 GCLMP48507 274 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 GPR15P49685 360 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 TNNC1P63316 161 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 FKBP3Q00688 224 aaKnown RBP17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 MORC3Q14149 939 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 DDR2Q16832 855 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 ZNF667Q5HYK9 610 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 MYCBPAPQ8TBZ2 947 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 TAF4BQ92750 862 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 SMARCD2Q92925 531 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 ELSPBP1Q96BH3 223 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 FUBP3Q96I24 572 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 ASB16Q96NS5 453 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 KXD1Q9BQD3 176 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 SDCBP2Q9H190 292 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 TRPV4Q9HBA0 871 aa17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 MAGEC2Q9UBF1 373 aaPredicted RBP17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 ARIH1Q9Y4X5 557 aaPredicted RBP17.25■□□□□ 0.35
PDLIM5-216ENST00000511767 KRBA1A5PL33 1030 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 FGF19O95750 216 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 HLA-DRAP01903 254 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 F11P03951 625 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 CFHP08603 1231 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 TRIM49P0CI25 452 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 TRIM49CP0CI26 452 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 FCARP24071 287 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 CCNE1P24864 410 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 GABRR2P28476 465 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 GTF2H1P32780 548 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 MAGEA11P43364 429 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 PSMC1P62191 440 aaKnown RBP17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 RPL10AP62906 217 aaKnown RBP17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 ZNF699Q32M78 642 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 IER5LQ5T953 404 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 SDHAF4Q5VUM1 108 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 CLEC17AQ6ZS10 378 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 TMEM150AQ86TG1 271 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 SPATA2LQ8IUW3 424 aaPredicted RBP17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 ATXN3LQ9H3M9 355 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 ZFP14Q9HCL3 533 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 ZNF318Q5VUA4 2279 aa17.24■□□□□ 0.35
PDLIM5-216ENST00000511767 LRRN2O75325 713 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 VIPR2P41587 438 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 CLCN5P51795 746 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 LRRC63Q05C16 580 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 VEPH1Q14D04 833 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 MAPRE1Q15691 268 aaKnown RBP17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 TAF12Q16514 161 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 C4orf50Q6ZRC1 276 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms