RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	GRXCR1	A8MXD5	290 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	MED7	O43513	233 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	ATP2C2	O75185	946 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	PTPN1	P18031	435 aa	Known RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	SSTR3	P32745	418 aa	Predicted RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	RGS19	P49795	217 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	CYP27A1	Q02318	531 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	YWHAH	Q04917	246 aa	Predicted RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	MRPL58	Q14197	206 aa	Known RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	CNGA2	Q16280	664 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	SGO2	Q562F6	1265 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	VARS2	Q5ST30	1063 aa	Known RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	NYAP1	Q6ZVC0	841 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	CEP57	Q86XR8	500 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	PALB2	Q86YC2	1186 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	RNF168	Q8IYW5	571 aa	Predicted RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	THEM5	Q8N1Q8	247 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	B3GALNT2	Q8NCR0	500 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	B3GALT6	Q96L58	329 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	ACBD6	Q9BR61	282 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	DNAI2	Q9GZS0	605 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	SEPT11	Q9NVA2	429 aa	Known RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	CDH9	Q9ULB4	789 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	NENF	Q9UMX5	172 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	PCDHGC3	Q9UN70	934 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	REXO2	Q9Y3B8	237 aa	Known RBP	12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	PCDHB12	Q9Y5F1	795 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	PCDHA13	Q9Y5I0	950 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	TSC2	P49815	1807 aa		12.52	□□□□□ -0.41
APBB3-217	ENST00000511459	MYBPHL	A2RUH7	354 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459		O00370	1275 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	PCSK1	P29120	753 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	CASQ1	P31415	396 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	GNG11	P61952	73 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	PSMC1	P62191	440 aa	Known RBP	12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	ETF1	P62495	437 aa	Known RBP	12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	IFI16	Q16666	785 aa	Known RBP	12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	RTP2	Q5QGT7	225 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	ARHGAP17	Q68EM7	881 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	LCLAT1	Q6UWP7	414 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	ZNF662	Q6ZS27	426 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	OR10T2	Q8NGX3	314 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	CYFIP2	Q96F07	1278 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	TMEM169	Q96HH4	297 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	ALS2CR12	Q96Q35	445 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	SYT15	Q9BQS2	421 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	TTPAL	Q9BTX7	342 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	PDCL3	Q9H2J4	239 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	CRTAC1	Q9NQ79	661 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	CHST7	Q9NS84	486 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	NAGPA	Q9UK23	515 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	GUCA1B	Q9UMX6	200 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	ATP8B3	O60423	1300 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	KIAA1671	Q9BY89	1806 aa		12.51	□□□□□ -0.41
APBB3-217	ENST00000511459	LINC01553	A4QN01	128 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	MICAL2	O94851	1124 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	SOD2	P04179	222 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	CYP1A1	P04798	512 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	GZMA	P12544	262 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	UNG	P13051	313 aa	Predicted RBP	12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	MYOG	P15173	224 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	BMP8B	P34820	402 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	PPM1A	P35813	382 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	BMPR1A	P36894	532 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	PLCB3	Q01970	1234 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	STIL	Q15468	1287 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	CCDC142	Q17RM4	750 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	CLEC16A	Q2KHT3	1053 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	USP41	Q3LFD5	358 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	INTS6L	Q5JSJ4	861 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	PPP1R2P3	Q6NXS1	205 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	DENND1B	Q6P3S1	775 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	ALKBH5	Q6P6C2	394 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	FAM171B	Q6P995	826 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	TRIM72	Q6ZMU5	477 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	DDX53	Q86TM3	631 aa	Known RBP	12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	LRRTM3	Q86VH5	581 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	PASD1	Q8IV76	773 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	WDTC1	Q8N5D0	677 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	MYCBPAP	Q8TBZ2	947 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	TMEM209	Q96SK2	561 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	PKMYT1	Q99640	499 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	LHX5	Q9H2C1	402 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	FAM49B	Q9NUQ9	324 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	TAS2R14	Q9NYV8	317 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	GTF3C4	Q9UKN8	822 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	TSPAN16	Q9UKR8	245 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	VWA8	A3KMH1	1905 aa		12.5	□□□□□ -0.41
APBB3-217	ENST00000511459	TMCO5B	A8MYB1	307 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459		H7C4K7	107 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459	TBC1D4	O60343	1298 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459	RTN2	O75298	545 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459	FGF18	O76093	207 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459	ARHGEF15	O94989	841 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459	H2AFZ	P0C0S5	128 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459	CCDC130	P13994	396 aa		12.49	□□□□□ -0.41
APBB3-217	ENST00000511459	CDH5	P33151	784 aa	Predicted RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms