RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 B3GALT2O43825 422 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 FBLP22087 321 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 GUCY1A2P33402 732 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 RFC4P35249 363 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 PER3P56645 1201 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 HUNKP57058 714 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 APBA1Q02410 837 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 MRPL49Q13405 166 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 GTF2H3Q13889 308 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 C3orf36Q3SXR2 165 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 TIGD2Q4W5G0 525 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 ATAT1Q5SQI0 421 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 PRAMEF14Q5SWL7 426 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 USP45Q70EL2 814 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 EPM2AIP1Q7L775 607 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 FAM83AQ86UY5 434 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 TCEAL8Q8IYN2 117 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 TRMT2AQ8IZ69 625 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 PQLC1Q8N2U9 271 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 REPS2Q8NFH8 660 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 GTPBP4Q9BZE4 634 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 SLC12A5Q9H2X9 1139 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 SORCS3Q9UPU3 1222 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 PCDHA13Q9Y5I0 950 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 PIEZO1Q92508 2521 aa4.53□□□□□ -1.68
TOPBP1-208ENST00000511439 TTC21AQ8NDW8 1320 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 ZNF541Q9H0D2 1346 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 WNT10BO00744 389 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 PRPF3O43395 683 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 SGTAO43765 313 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 STC2O76061 302 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 LMNAP02545 664 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 AMY1AP04745 511 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 U2AF1L5P0DN76 240 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 LAG3P18627 525 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 LPOP22079 712 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 U2AF1Q01081 240 aaKnown RBP eCLIP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 IL10RAQ13651 578 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 CXorf57Q6NSI4 855 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 RGMBQ6NW40 437 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 PDZD4Q76G19 769 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 ZNF572Q7Z3I7 529 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 CATIPQ7Z7H3 387 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 RHOT1Q8IXI2 618 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 MDM1Q8TC05 714 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 CPT1CQ8TCG5 803 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 CEP95Q96GE4 821 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 UHRF1Q96T88 793 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 CPPED1Q9BRF8 314 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 C1QTNF1Q9BXJ1 281 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 TOR3AQ9H497 397 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 MANSC1Q9H8J5 431 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 LANCL2Q9NS86 450 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 EIF2B4Q9UI10 523 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 NOB1Q9ULX3 412 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 HDAC5Q9UQL6 1122 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 PCDHB1Q9Y5F3 818 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 HS3ST4Q9Y661 456 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 CFAP20Q9Y6A4 193 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 ATRNL1Q5VV63 1379 aa4.52□□□□□ -1.69
TOPBP1-208ENST00000511439 CEP290O15078 2479 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 AKAP11Q9UKA4 1901 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 SCAF4O95104 1147 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 NUDT3O95989 172 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 ALOX15P16050 662 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 HK1P19367 917 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 PROZP22891 400 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 PTPN7P35236 360 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 FLT3LGP49771 235 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 CDC42EP1Q00587 391 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 DSC2Q02487 901 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 DDR1Q08345 913 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 SP140Q13342 867 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 FAM47AQ5JRC9 791 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 MFSD14BQ5SR56 506 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 PPP4R3AQ6IN85 833 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 B3GNT9Q6UX72 402 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 USP50Q70EL3 339 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 DOK3Q7L591 496 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 GPC2Q8N158 579 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 MYO1HQ8N1T3 1032 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 MAGEB6Q8N7X4 407 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 CCHCR1Q8TD31 782 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 CASKIN2Q8WXE0 1202 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 HPS3Q969F9 1004 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 MYEOVQ96EZ4 313 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 DMRTA2Q96SC8 542 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 DCLRE1CQ96SD1 692 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 SLC46A2Q9BY10 475 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 SENP6Q9GZR1 1112 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 LDAHQ9H6V9 325 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 RIOX1Q9H6W3 641 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 CYP4F11Q9HBI6 524 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 ANLNQ9NQW6 1124 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 NR2E3Q9Y5X4 410 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 FER1L6Q2WGJ9 1857 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 TTC28Q96AY4 2481 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 NFAT5O94916 1531 aa4.51□□□□□ -1.69
TOPBP1-208ENST00000511439 MYBBP1AQ9BQG0 1328 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms