RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LRIT1Q9P2V4 623 aa8.66□□□□□ -1.02
USP53-206ENST00000510737 BRINP1O60477 761 aa8.65□□□□□ -1.02
USP53-206ENST00000510737 SLC6A4P31645 630 aa8.65□□□□□ -1.02
USP53-206ENST00000510737 ATXN1P54253 815 aaKnown RBP8.65□□□□□ -1.02
USP53-206ENST00000510737 FOXR2Q6PJQ5 311 aa8.65□□□□□ -1.02
USP53-206ENST00000510737 DCBLD1Q8N8Z6 715 aa8.65□□□□□ -1.02
USP53-206ENST00000510737 FCER1AP12319 257 aa8.64□□□□□ -1.03
USP53-206ENST00000510737 SRRM1Q8IYB3 904 aaKnown RBP8.64□□□□□ -1.03
USP53-206ENST00000510737 C16orf71Q8IYS4 520 aaPredicted RBP8.64□□□□□ -1.03
USP53-206ENST00000510737 NUP133Q8WUM0 1156 aa8.64□□□□□ -1.03
USP53-206ENST00000510737 DPF2Q92785 391 aa8.64□□□□□ -1.03
USP53-206ENST00000510737 AHCYL2Q96HN2 611 aaKnown RBP8.64□□□□□ -1.03
USP53-206ENST00000510737 ASB6Q9NWX5 421 aa8.64□□□□□ -1.03
USP53-206ENST00000510737 TRPM1Q7Z4N2 1603 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 CDK4P11802 303 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 MASP1P48740 699 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 PROK1P58294 105 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 FITM2Q8N6M3 262 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 COG1Q8WTW3 980 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 DNM3Q9UQ16 869 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 BTAF1O14981 1849 aa8.63□□□□□ -1.03
USP53-206ENST00000510737 ERN1O75460 977 aaKnown RBP8.62□□□□□ -1.03
USP53-206ENST00000510737 DDCP20711 480 aa8.62□□□□□ -1.03
USP53-206ENST00000510737 SOX5P35711 763 aa8.62□□□□□ -1.03
USP53-206ENST00000510737 ERVK-21P61565 698 aa8.62□□□□□ -1.03
USP53-206ENST00000510737 SF3B3Q15393 1217 aaKnown RBP8.62□□□□□ -1.03
USP53-206ENST00000510737 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.62□□□□□ -1.03
USP53-206ENST00000510737 TBC1D15Q8TC07 691 aa8.62□□□□□ -1.03
USP53-206ENST00000510737 PNKPQ96T60 521 aa8.62□□□□□ -1.03
USP53-206ENST00000510737 COL18A1P39060 1754 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 MYBBP1AQ9BQG0 1328 aaKnown RBP8.61□□□□□ -1.03
USP53-206ENST00000510737 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 TEX33O43247 280 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 SLC5A3P53794 718 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 KIAA0895LQ68EN5 471 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 SMIM5Q71RC9 77 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
USP53-206ENST00000510737 SH2D3CQ8N5H7 860 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 CHAC2Q8WUX2 184 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 ANKS1AQ92625 1134 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 CYFIP2Q96F07 1278 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 TLR10Q9BXR5 811 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 ARPP21Q9UBL0 812 aaPredicted RBP8.61□□□□□ -1.03
USP53-206ENST00000510737 ZBTB21Q9ULJ3 1066 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
USP53-206ENST00000510737 ABCC6O95255 1503 aa8.6□□□□□ -1.03
USP53-206ENST00000510737 QRICH2Q9H0J4 1663 aa8.6□□□□□ -1.03
USP53-206ENST00000510737 KIAA0391O15091 583 aaKnown RBP8.6□□□□□ -1.03
USP53-206ENST00000510737 COLGALT2Q8IYK4 626 aa8.6□□□□□ -1.03
USP53-206ENST00000510737 RAB24Q969Q5 203 aa8.6□□□□□ -1.03
USP53-206ENST00000510737 SLC17A6Q9P2U8 582 aa8.6□□□□□ -1.03
USP53-206ENST00000510737 CCNL1Q9UK58 526 aaPredicted RBP8.6□□□□□ -1.03
USP53-206ENST00000510737 PPIP5K1Q6PFW1 1433 aa8.6□□□□□ -1.03
USP53-206ENST00000510737 CCDC7Q96M83 1385 aa8.6□□□□□ -1.03
USP53-206ENST00000510737 GPR39O43194 453 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 ELFN1P0C7U0 828 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 ALAS1P13196 640 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 RGS19P49795 217 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 DACT2Q5SW24 774 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 MED15Q96RN5 788 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 FAM126AQ9BYI3 521 aaPredicted RBP8.59□□□□□ -1.03
USP53-206ENST00000510737 ZNF277Q9NRM2 450 aaPredicted RBP8.59□□□□□ -1.03
USP53-206ENST00000510737 DMTF1Q9Y222 760 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 GPR45Q9Y5Y3 372 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 ITSN1Q15811 1721 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 PIK3C2AO00443 1686 aa8.59□□□□□ -1.03
USP53-206ENST00000510737 C10orf71Q711Q0 1435 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 TRGV11A0A075B6L2 103 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 FAM171A2A8MVW0 826 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 SBK3P0C264 359 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 FOLR3P41439 243 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 VWA1Q6PCB0 445 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 NRG4Q8WWG1 115 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 ABHD8Q96I13 439 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 WDR26Q9H7D7 661 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 SLIT3O75094 1523 aa8.58□□□□□ -1.04
USP53-206ENST00000510737 WIPF3A6NGB9 483 aa8.57□□□□□ -1.04
USP53-206ENST00000510737 DNAJC9-AS1A6NH13 148 aa8.57□□□□□ -1.04
USP53-206ENST00000510737 PEX1O43933 1283 aa8.57□□□□□ -1.04
USP53-206ENST00000510737 PROP1O75360 226 aa8.57□□□□□ -1.04
USP53-206ENST00000510737 AGXTP21549 392 aa8.57□□□□□ -1.04
USP53-206ENST00000510737 CPSF1Q10570 1443 aaKnown RBP8.56□□□□□ -1.04
USP53-206ENST00000510737 A0A0G2JLW4 131 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 YY2O15391 372 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 GATA3P23771 443 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 MAPK10P53779 464 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 TARDBPQ13148 414 aaKnown RBP eCLIP8.56□□□□□ -1.04
USP53-206ENST00000510737 ZNF788Q6ZQV5 615 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 KCNH5Q8NCM2 988 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 C11orf54Q9H0W9 315 aaPredicted RBP8.56□□□□□ -1.04
USP53-206ENST00000510737 MANSC1Q9H8J5 431 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 NSD2O96028 1365 aa8.56□□□□□ -1.04
USP53-206ENST00000510737 KCPQ6ZWJ8 1503 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 PKD1L3Q7Z443 1732 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 KIAA1551Q9HCM1 1747 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 A0A1W2PS29 197 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 TLDC2A0PJX2 215 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 POU3F3P20264 500 aaPredicted RBP8.55□□□□□ -1.04
USP53-206ENST00000510737 CTXN1P60606 82 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms