RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 TMEM150AQ86TG1 271 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 CHFRQ96EP1 664 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 TMX3Q96JJ7 454 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 P2RY13Q9BPV8 354 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 LSM14BQ9BX40 385 aaKnown RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 CCSER1Q9C0I3 900 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 SMOC1Q9H4F8 434 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 FBRSL1Q9HCM7 1045 aaKnown RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 POLR3BQ9NW08 1133 aaPredicted RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 AGO2Q9UKV8 859 aaKnown RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
DDX41-211ENST00000510171 SPTBN2O15020 2390 aa11.23□□□□□ -0.61
DDX41-211ENST00000510171 H3BQV1 296 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
DDX41-211ENST00000510171 TBCAO75347 108 aaKnown RBP11.22□□□□□ -0.61
DDX41-211ENST00000510171 RHOBTB1O94844 696 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 KCNK5O95279 499 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 COL4A2P08572 1712 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 RPL10AP62906 217 aaKnown RBP11.22□□□□□ -0.61
DDX41-211ENST00000510171 TSPY1Q01534 308 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 MCM6Q14566 821 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
DDX41-211ENST00000510171 ELF2Q15723 593 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
DDX41-211ENST00000510171 SV2CQ496J9 727 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 ZC2HC1CQ53FD0 456 aaPredicted RBP11.22□□□□□ -0.61
DDX41-211ENST00000510171 RNF43Q68DV7 783 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 CPA6Q8N4T0 437 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 HHIPQ96QV1 700 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 FIZ1Q96SL8 496 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 EPG5Q9HCE0 2579 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 BLOC1S4Q9NUP1 217 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 TMLHEQ9NVH6 421 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 UXTQ9UBK9 157 aaPredicted RBP11.22□□□□□ -0.61
DDX41-211ENST00000510171 STYXL1Q9Y6J8 313 aa11.22□□□□□ -0.61
DDX41-211ENST00000510171 ACACBO00763 2458 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 TISP43B9A030 160 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 IL18RAPO95256 599 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 APBB3O95704 486 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 CAVIN2O95810 425 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 GJA4P35212 333 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 PNPLA4P41247 253 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 GPR15P49685 360 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 CREB5Q02930 508 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 FAM160A1Q05DH4 1040 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 DMC1Q14565 340 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 MTF1Q14872 753 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 KARSQ15046 597 aaKnown RBP11.21□□□□□ -0.61
DDX41-211ENST00000510171 POSTNQ15063 836 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 SDHAF4Q5VUM1 108 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 SYT13Q7L8C5 426 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 PDCL2Q8N4E4 241 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
DDX41-211ENST00000510171 TTC16Q8NEE8 873 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 RPLP0P6Q8NHW5 317 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 RIN3Q8TB24 985 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 OSCP1Q8WVF1 389 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 POMGNT1Q8WZA1 660 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 RAD54LQ92698 747 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 CD101Q93033 1021 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 ZNF560Q96MR9 790 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 DUSP15Q9H1R2 295 aaPredicted RBP11.21□□□□□ -0.61
DDX41-211ENST00000510171 ST6GALNAC4Q9H4F1 302 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 ECT2Q9H8V3 914 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 ABCB6Q9NP58 842 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 DUS2Q9NX74 493 aaKnown RBP11.21□□□□□ -0.61
DDX41-211ENST00000510171 EBF1Q9UH73 591 aa11.21□□□□□ -0.61
DDX41-211ENST00000510171 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.61
DDX41-211ENST00000510171 TICRRQ7Z2Z1 1910 aa11.21□□□□□ -0.62
DDX41-211ENST00000510171 TRAV19A0A0A6YYK7 116 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 DCLK1O15075 740 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 NOL4O94818 638 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 USP17L7P0C7H9 530 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 PLCG1P19174 1290 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 CYP2F1P24903 491 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 GJB2P29033 226 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 DDIT3P35638 169 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 IFNAR2P48551 515 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 NR1H3Q13133 447 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 PSMD2Q13200 908 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 DDR2Q16832 855 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
DDX41-211ENST00000510171 TCEAL6Q6IPX3 200 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 PSAPL1Q6NUJ1 521 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 CRELD2Q6UXH1 353 aaPredicted RBP11.2□□□□□ -0.62
DDX41-211ENST00000510171 ZNF720Q7Z2F6 126 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 NT5DC4Q86YG4 428 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 EFCAB13Q8IY85 973 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 STKLD1Q8NE28 680 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 CCDC26Q8TAB7 109 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 LRRC15Q8TF66 581 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 LEO1Q8WVC0 666 aaPredicted RBP11.2□□□□□ -0.62
DDX41-211ENST00000510171 ATP2A3Q93084 1043 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 TCEAL3Q969E4 200 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 ACDQ96AP0 544 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 MYRFLQ96LU7 910 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 CYP2S1Q96SQ9 504 aa11.2□□□□□ -0.62
DDX41-211ENST00000510171 ACBD6Q9BR61 282 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms