RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 KNL1Q8NG31 2342 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 TCRBV21S2A2A0A5A6 115 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 SLC37A4O43826 429 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 OAZ2O95190 189 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 KLF8O95600 359 aaPredicted RBP11.78□□□□□ -0.52
SNF8-207ENST00000509995 EDN1P05305 212 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 ZNF883P0CG24 379 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
SNF8-207ENST00000509995 DDX6P26196 483 aaKnown RBP eCLIP11.78□□□□□ -0.523e-6■□□□□ 10
SNF8-207ENST00000509995 RPL9P32969 192 aaKnown RBP11.78□□□□□ -0.52
SNF8-207ENST00000509995 OPRD1P41143 372 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 SCRN1Q12765 414 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 LY6DQ14210 128 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 EML3Q32P44 896 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 HSF5Q4G112 596 aaPredicted RBP11.78□□□□□ -0.52
SNF8-207ENST00000509995 XKR4Q5GH76 650 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 PPP4R3AQ6IN85 833 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 MOXD1Q6UVY6 613 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 TRIML1Q8N9V2 468 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 IL17RCQ8NAC3 791 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 ATAD1Q8NBU5 361 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 ZMAT2Q96NC0 199 aaKnown RBP11.78□□□□□ -0.52
SNF8-207ENST00000509995 IL17BQ9UHF5 180 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 DDX25Q9UHL0 483 aaKnown RBP11.78□□□□□ -0.52
SNF8-207ENST00000509995 BRPF3Q9ULD4 1205 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 ABCA12Q86UK0 2595 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 MYLKQ15746 1914 aa11.78□□□□□ -0.52
SNF8-207ENST00000509995 FLRT2O43155 660 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 KRT38O76015 456 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 GNSP15586 552 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 NMT1P30419 496 aaKnown RBP11.77□□□□□ -0.53
SNF8-207ENST00000509995 IFNAR2P48551 515 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 CTTNQ14247 550 aaKnown RBP11.77□□□□□ -0.53
SNF8-207ENST00000509995 ZNF268Q14587 947 aaPredicted RBP11.77□□□□□ -0.53
SNF8-207ENST00000509995 VEPH1Q14D04 833 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 EPHA7Q15375 998 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 PTPRNQ16849 979 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 PREPLQ4J6C6 727 aaPredicted RBP11.77□□□□□ -0.53
SNF8-207ENST00000509995 EOGTQ5NDL2 527 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 PRICKLE2Q7Z3G6 844 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 TMEM150AQ86TG1 271 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 RGL4Q8IZJ4 473 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 DYDC2Q96IM9 177 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 CCDC113Q9H0I3 377 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 IL21RQ9HBE5 538 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 KCNMB3Q9NPA1 279 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 TOPORSQ9NS56 1045 aaPredicted RBP11.77□□□□□ -0.53
SNF8-207ENST00000509995 TM7SF3Q9NS93 570 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 WNT6Q9Y6F9 365 aa11.77□□□□□ -0.53
SNF8-207ENST00000509995 IGHV1OR15-9A0A0B4J2B8 117 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 OR6C75A6NL08 312 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 ACKR2O00590 384 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 ADAM23O75077 832 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 LARGE1O95461 756 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 CER1O95813 267 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 ATF6P18850 670 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 MARCKSP29966 332 aaPredicted RBP11.76□□□□□ -0.53
SNF8-207ENST00000509995 YARSP54577 528 aaKnown RBP11.76□□□□□ -0.53
SNF8-207ENST00000509995 NR1H3Q13133 447 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 ZNF77Q15935 545 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 PKDCCQ504Y2 493 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 DHRS13Q6UX07 377 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 DBX2Q6ZNG2 339 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 CHD1LQ86WJ1 897 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 TMPRSS12Q86WS5 348 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 SPACA3Q8IXA5 215 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 EFCAB13Q8IY85 973 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 C18orf25Q96B23 403 aaPredicted RBP11.76□□□□□ -0.53
SNF8-207ENST00000509995 FAM20AQ96MK3 541 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
SNF8-207ENST00000509995 C22orf23Q9BZE7 217 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 TRIM4Q9C037 500 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 C2orf40Q9H1Z8 148 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 GPRC5CQ9NQ84 441 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 CALCOCO1Q9P1Z2 691 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 ANKMY1Q9P2S6 941 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
SNF8-207ENST00000509995 FNDC3AQ9Y2H6 1198 aaKnown RBP11.76□□□□□ -0.53
SNF8-207ENST00000509995 TIMM13Q9Y5L4 95 aaPredicted RBP11.76□□□□□ -0.53
SNF8-207ENST00000509995 AK5Q9Y6K8 562 aa11.76□□□□□ -0.53
SNF8-207ENST00000509995 TMEM131Q92545 1883 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 M0QZQ0 153 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 SGSM2O43147 1006 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 CILPO75339 1184 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 KCNE1P15382 129 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 CHMLP26374 656 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 TIE1P35590 1138 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
SNF8-207ENST00000509995 RARRES1P49788 294 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 RCAN1P53805 252 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 NLRP12P59046 1061 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 USP4Q13107 963 aa11.75□□□□□ -0.53
SNF8-207ENST00000509995 MYBPC2Q14324 1141 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms