RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-208	ENST00000509828	MON1A	Q86VX9	555 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	MYCT1	Q8N699	235 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	FBXO18	Q8NFZ0	1043 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	ATP2A3	Q93084	1043 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	PI4K2A	Q9BTU6	479 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	ADAM33	Q9BZ11	813 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	TPSD1	Q9BZJ3	242 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	ECT2	Q9H8V3	914 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	IL21	Q9HBE4	155 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	UXT	Q9UBK9	157 aa	Predicted RBP	11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	EBF1	Q9UH73	591 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	PCDHB6	Q9Y5E3	794 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	COL4A2	P08572	1712 aa		11.18	□□□□□ -0.62
MBD4-208	ENST00000509828	TRIP11	Q15643	1979 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	TRAV19	A0A0A6YYK7	116 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	LNP1	A1A4G5	178 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	OTOL1	A6NHN0	477 aa	Predicted RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828		K7ENM7	598 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	ALDH1A2	O94788	518 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	FAM13A	O94988	1023 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	F11	P03951	625 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	CYP11A1	P05108	521 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	CKM	P06732	381 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	USP17L7	P0C7H9	530 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	PLA2G4B	P0C869	781 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	CSRP1	P21291	193 aa	Known RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	RPL10A	P62906	217 aa	Known RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	HMGN5	P82970	282 aa	Known RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	MTF1	Q14872	753 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	ACAP1	Q15027	740 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	C2orf27A	Q580R0	203 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	WSCD1	Q658N2	575 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	MCTP1	Q6DN14	999 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	ANO7	Q6IWH7	933 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	KIAA1211L	Q6NV74	962 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	KCNK18	Q7Z418	384 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	SYT2	Q8N9I0	419 aa	Predicted RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	KDF1	Q8NAX2	398 aa	Predicted RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	DEFB124	Q8NES8	71 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	RASSF8	Q8NHQ8	419 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	LLPH	Q9BRT6	129 aa	Known RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	SCNM1	Q9BWG6	230 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	NUSAP1	Q9BXS6	441 aa	Known RBP	11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	HAPLN2	Q9GZV7	340 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	DPP3	Q9NY33	737 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	KCND2	Q9NZV8	630 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	TBX20	Q9UMR3	447 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	LIMCH1	Q9UPQ0	1083 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	CEP295	Q9C0D2	2601 aa		11.17	□□□□□ -0.62
MBD4-208	ENST00000509828	SOBP	A7XYQ1	873 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	PIR	O00625	290 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	EIF5B	O60841	1220 aa	Known RBP	11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	NFIC	P08651	508 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	SCP2	P22307	547 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	PRPH	P41219	470 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	MAPK8	P45983	427 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	ACOT2	P49753	483 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	ATXN3	P54252	364 aa	Predicted RBP	11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	IRX4	P78413	519 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	LMAN2	Q12907	356 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	NFE2	Q16621	373 aa	Predicted RBP	11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	SV2C	Q496J9	727 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	SDHAF4	Q5VUM1	108 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	ADAL	Q6DHV7	355 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	LPCAT2	Q7L5N7	544 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	LRRTM3	Q86VH5	581 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	PGBD3	Q8N328	593 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	CCDC33	Q8N5R6	958 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	FSIP1	Q8NA03	581 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	OSCP1	Q8WVF1	389 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	CYP2S1	Q96SQ9	504 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	LHX6	Q9UPM6	363 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	DERA	Q9Y315	318 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	WNT6	Q9Y6F9	365 aa		11.16	□□□□□ -0.62
MBD4-208	ENST00000509828	PDCD11	Q14690	1871 aa	Known RBP	11.16	□□□□□ -0.62
MBD4-208	ENST00000509828		A0A0B4J269	797 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	SRRM3	A6NNA2	597 aa	Predicted RBP	11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	KPNA7	A9QM74	516 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	PATE3	B3GLJ2	98 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	TBCA	O75347	108 aa	Known RBP	11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	SEC24B	O95487	1268 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	NFATC1	O95644	943 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	TOP3B	O95985	862 aa	Known RBP	11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	GPR15	P49685	360 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	NCKAP1L	P55160	1127 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	FAM160A1	Q05DH4	1040 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	ZNF268	Q14587	947 aa	Predicted RBP	11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	KCNB1	Q14721	858 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	DDR2	Q16832	855 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	TRIM61	Q5EBN2	209 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	PMS2CL	Q68D20	193 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	NAIF1	Q69YI7	327 aa	Predicted RBP	11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	SLFN12L	Q6IEE8	588 aa		11.15	□□□□□ -0.62
MBD4-208	ENST00000509828	ARMCX6	Q7L4S7	300 aa		11.15	□□□□□ -0.62

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